Cluster: AG427_4_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: AG427_4
- CGC Family ID: CGCFAM_01179
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_13749 | k141_13749_20 | 21608 | 22534 | + | 1.A.30.2.9 |
| pfam | k141_13749 | k141_13749_21 | 22571 | 23017 | + | ExbD |
| STP | k141_13749 | k141_13749_22 | 23014 | 25446 | + | TPR_2 |
| CAZyme | k141_13749 | k141_13749_23 | 25471 | 27264 | + | GT51 |
Gene ID: k141_13749_20
Type: TC
Location: 21608 - 22534 (+)
Type: TC
Location: 21608 - 22534 (+)
Gene ID: k141_13749_21
Type: pfam
Location: 22571 - 23017 (+)
Type: pfam
Location: 22571 - 23017 (+)
Gene ID: k141_13749_22
Type: STP
Location: 23014 - 25446 (+)
Type: STP
Location: 23014 - 25446 (+)
Gene ID: k141_13749_23
Type: CAZyme
Location: 25471 - 27264 (+)
Type: CAZyme
Location: 25471 - 27264 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_13749_21 | vegetarian > vegan | 1.01681 | 0.01794 |