Genome Details
Selected Rep_genome_ID: AG352_56
Total Genomes Found: 34
Total Genomes Found: 34
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger qucibialis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG352_56 | 2,500,335 | 99.32% | 0% | NA | Africa | H3AfricaPhase2 |
| B34.bin_17 | 3,310,831 | 99.32% | 0.68% | China(Inner Mongolia) | Asia | IMGG |
| CGMR020773 | 2,478,906 | 98.02% | 0% | China | Asia | CGMR |
| GCA_021620765.1_ASM2162076v1_genomic | 3,510,652 | 99.32% | 2.38% | NA | Africa | H3AfricaPhase1 |
| GCA_021623025.1_ASM2162302v1_genomic | 2,624,679 | 95.31% | 0.68% | NA | Africa | H3AfricaPhase1 |
| GCA_021624945.1_ASM2162494v1_genomic | 2,339,668 | 95.77% | 0.85% | NA | Africa | H3AfricaPhase1 |
| GCA_021626365.1_ASM2162636v1_genomic | 2,381,278 | 95.79% | 0.68% | NA | Africa | H3AfricaPhase1 |
| GCA_021636875.1_ASM2163687v1_genomic | 2,621,824 | 96.91% | 1.02% | NA | Africa | H3AfricaPhase1 |
| GCA_021636965.1_ASM2163696v1_genomic | 2,189,277 | 94.56% | 0.68% | NA | Africa | H3AfricaPhase1 |
| GCA_021638445.1_ASM2163844v1_genomic | 2,326,351 | 98.05% | 1.02% | NA | Africa | H3AfricaPhase1 |
| HRGMv2_2663 | 2,316,355 | 98.63% | 0.021% | South Korea | Asia | HRGM |
| MGYG000003937 | 2,463,546 | 98.3% | 0% | United Kingdom | Europe | UHGG |
| Rep_3047 | 2,711,089 | 97.9592% | 0.680272% | NA | NA | WIS |
| SPMP04_bin.15 | 2,747,028 | 94.26% | 0.68% | Singapore | Asia | SPMP |
| SPMP10_bin.47 | 2,574,566 | 97.2% | 0.68% | Singapore | Asia | SPMP |
| SPMP102_bin.6 | 2,668,511 | 95.24% | 1.36% | Singapore | Asia | SPMP |
| SPMP12_bin.45 | 2,887,440 | 96.98% | 0.68% | Singapore | Asia | SPMP |
| SPMP18_bin.45 | 2,794,775 | 91.02% | 3.15% | Singapore | Asia | SPMP |
| SPMP25_bin.11 | 2,946,849 | 93.56% | 0.68% | Singapore | Asia | SPMP |
| SPMP28_bin.22 | 2,741,466 | 95.58% | 1.36% | Singapore | Asia | SPMP |
| SPMP30_bin.11 | 2,876,823 | 98.64% | 0.68% | Singapore | Asia | SPMP |
| SPMP31_bin.94 | 2,416,778 | 92.63% | 0.68% | Singapore | Asia | SPMP |
| SPMP38_bin.89 | 2,882,656 | 97.28% | 2.04% | Singapore | Asia | SPMP |
| SPMP40_bin.59 | 2,503,606 | 97.73% | 0.68% | Singapore | Asia | SPMP |
| SPMP43_bin.18 | 2,954,034 | 97.9% | 1.36% | Singapore | Asia | SPMP |
| SPMP46_bin.47 | 2,641,798 | 98.64% | 0.68% | Singapore | Asia | SPMP |
| SPMP48_bin.40 | 2,958,931 | 97.46% | 0.68% | Singapore | Asia | SPMP |
| SPMP57_bin.106 | 2,745,332 | 97.96% | 1.36% | Singapore | Asia | SPMP |
| SPMP66_bin.22 | 3,151,108 | 96.81% | 1.36% | Singapore | Asia | SPMP |
| SPMP82_bin.63 | 2,767,256 | 92.74% | 1.59% | Singapore | Asia | SPMP |
| SPMP88_bin.111 | 2,858,170 | 95.51% | 1.45% | Singapore | Asia | SPMP |
| SPMP96_bin.17 | 2,801,930 | 91.76% | 1.36% | Singapore | Asia | SPMP |
| SPMP97_bin.82 | 2,377,689 | 90.9% | 0.68% | Singapore | Asia | SPMP |
| SPMP99_bin.115 | 2,514,581 | 99.32% | 0.68% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| AG352_56_CGC4 | CGCFAM_00008 | Yes | 6 | 2 | |
| AG352_56_CGC11 | CGCFAM_00021 | Yes | 6 | 2 | |
| AG352_56_CGC14 | CGCFAM_00038 | Yes | 4 | 3 | |
| AG352_56_CGC21 | CGCFAM_00041 | Yes | 7 | 3 | |
| AG352_56_CGC1 | CGCFAM_00051 | Yes | 3 | 2 | |
| AG352_56_CGC10 | CGCFAM_00078 | Yes | 3 | 2 | galactan |
| AG352_56_CGC2 | CGCFAM_00103 | Yes | 3 | 1 | |
| AG352_56_CGC18 | CGCFAM_00190 | Yes | 7 | 2 | |
| AG352_56_CGC13 | CGCFAM_00462 | Yes | 13 | 5 | |
| AG352_56_CGC7 | CGCFAM_00507 | Yes | 4 | 2 | |
| AG352_56_CGC20 | CGCFAM_00764 | Yes | 3 | 1 | |
| AG352_56_CGC15 | CGCFAM_01316 | Yes | 6 | 3 | |
| AG352_56_CGC27 | CGCFAM_01317 | Yes | 6 | 2 | |
| AG352_56_CGC6 | CGCFAM_03280 | Yes | 4 | 1 |
Top CAZyme Families