Cluster: AG352_56_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: AG352_56
- CGC Family ID: CGCFAM_00021
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_237794 | k141_237794_2 | 925 | 2475 | - | GH3 |
| pfam | k141_237794 | k141_237794_3 | 2787 | 3668 | - | ROK |
| CAZyme | k141_237794 | k141_237794_4 | 4091 | 5197 | - | CE9 |
| STP | k141_237794 | k141_237794_5 | 5492 | 6391 | - | SIS |
| TC | k141_237794 | k141_237794_6 | 6446 | 7318 | - | 3.A.1.1.29 |
| TC | k141_237794 | k141_237794_7 | 7332 | 8285 | - | 3.A.1.1.10 |
Gene ID: k141_237794_2
Type: CAZyme
Location: 925 - 2475 (-)
Type: CAZyme
Location: 925 - 2475 (-)
Gene ID: k141_237794_3
Type: pfam
Location: 2787 - 3668 (-)
Type: pfam
Location: 2787 - 3668 (-)
Gene ID: k141_237794_4
Type: CAZyme
Location: 4091 - 5197 (-)
Type: CAZyme
Location: 4091 - 5197 (-)
Gene ID: k141_237794_5
Type: STP
Location: 5492 - 6391 (-)
Type: STP
Location: 5492 - 6391 (-)
Gene ID: k141_237794_6
Type: TC
Location: 6446 - 7318 (-)
Type: TC
Location: 6446 - 7318 (-)
Gene ID: k141_237794_7
Type: TC
Location: 7332 - 8285 (-)
Type: TC
Location: 7332 - 8285 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger qucibialis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_237794_2 | vegetarian > omnivore | 1.04270 | 0.01287 |
| k141_237794_3 | vegan > omnivore | 1.13074 | 0.01238 |
| k141_237794_3 | vegetarian > omnivore | 1.11952 | 0.01287 |
| k141_237794_7 | vegan > omnivore | 1.20108 | 0.01238 |