Cluster: AG352_56_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: AG352_56
- CGC Family ID: CGCFAM_00190
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_133023 | k141_133023_8 | 6717 | 7634 | - | 3.A.1.2.17 |
| TC | k141_133023 | k141_133023_9 | 7636 | 8805 | - | 3.A.1.2.17 |
| TC | k141_133023 | k141_133023_10 | 8809 | 10341 | - | 3.A.1.2.12 |
| CAZyme | k141_133023 | k141_133023_11 | 10833 | 12152 | - | GH13_20 |
| NULL(UNKNOWN) | k141_133023 | k141_133023_12 | 12361 | 12903 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_133023 | k141_133023_13 | 13038 | 13868 | - | CE4 |
| TC | k141_133023 | k141_133023_14 | 13947 | 15434 | - | 2.A.38.1.1 |
Gene ID: k141_133023_8
Type: TC
Location: 6717 - 7634 (-)
Type: TC
Location: 6717 - 7634 (-)
Gene ID: k141_133023_9
Type: TC
Location: 7636 - 8805 (-)
Type: TC
Location: 7636 - 8805 (-)
Gene ID: k141_133023_10
Type: TC
Location: 8809 - 10341 (-)
Type: TC
Location: 8809 - 10341 (-)
Gene ID: k141_133023_11
Type: CAZyme
Location: 10833 - 12152 (-)
Type: CAZyme
Location: 10833 - 12152 (-)
Gene ID: k141_133023_12
Type:
Location: 12361 - 12903 (-)
Type:
Location: 12361 - 12903 (-)
Gene ID: k141_133023_13
Type: CAZyme
Location: 13038 - 13868 (-)
Type: CAZyme
Location: 13038 - 13868 (-)
Gene ID: k141_133023_14
Type: TC
Location: 13947 - 15434 (-)
Type: TC
Location: 13947 - 15434 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger qucibialis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.