Cluster: AG352_56_CGC21
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: AG352_56
- CGC Family ID: CGCFAM_00041
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_226941 | k141_226941_15 | 17541 | 18455 | + | 3.A.1.1.11 |
| TC | k141_226941 | k141_226941_16 | 18475 | 19338 | + | 3.A.1.1.11 |
| TF | k141_226941 | k141_226941_17 | 19672 | 20544 | - | HTH_AraC | HTH_AraC |
| CAZyme | k141_226941 | k141_226941_18 | 20693 | 22252 | + | GH28 |
| CAZyme | k141_226941 | k141_226941_19 | 22256 | 23398 | + | GH105 |
| pfam | k141_226941 | k141_226941_20 | 23414 | 24241 | + | AP_endonuc_2 |
| CAZyme | k141_226941 | k141_226941_21 | 24321 | 25295 | + | CE8 |
Gene ID: k141_226941_15
Type: TC
Location: 17541 - 18455 (+)
Type: TC
Location: 17541 - 18455 (+)
Gene ID: k141_226941_16
Type: TC
Location: 18475 - 19338 (+)
Type: TC
Location: 18475 - 19338 (+)
Gene ID: k141_226941_17
Type: TF
Location: 19672 - 20544 (-)
Type: TF
Location: 19672 - 20544 (-)
Gene ID: k141_226941_18
Type: CAZyme
Location: 20693 - 22252 (+)
Type: CAZyme
Location: 20693 - 22252 (+)
Gene ID: k141_226941_19
Type: CAZyme
Location: 22256 - 23398 (+)
Type: CAZyme
Location: 22256 - 23398 (+)
Gene ID: k141_226941_20
Type: pfam
Location: 23414 - 24241 (+)
Type: pfam
Location: 23414 - 24241 (+)
Gene ID: k141_226941_21
Type: CAZyme
Location: 24321 - 25295 (+)
Type: CAZyme
Location: 24321 - 25295 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger qucibialis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.