Genome Details
Selected Rep_genome_ID: AG280_7
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp902464115
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG280_7 | 2,638,598 | 97.99% | 0% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_2778 | 2,321,822 | 97.98% | 0% | Indonesia | Asia | HRGM |
| Rep_3346 | 2,224,694 | 96.6443% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| AG280_7_CGC16 | CGCFAM_00011 | Yes | 5 | 1 | |
| AG280_7_CGC14 | CGCFAM_00067 | Yes | 5 | 2 | galactan |
| AG280_7_CGC21 | CGCFAM_00097 | Yes | 4 | 1 | |
| AG280_7_CGC29 | CGCFAM_00202 | Yes | 3 | 1 | |
| AG280_7_CGC15 | CGCFAM_00203 | Yes | 4 | 1 | |
| AG280_7_CGC6 | CGCFAM_00317 | Yes | 5 | 2 | |
| AG280_7_CGC25 | CGCFAM_02333 | Yes | 4 | 1 | |
| AG280_7_CGC13 | CGCFAM_02510 | Yes | 4 | 1 | |
| AG280_7_CGC10 | CGCFAM_03245 | Yes | 10 | 4 | |
| AG280_7_CGC27 | CGCFAM_03247 | Yes | 7 | 1 | |
| AG280_7_CGC8 | CGCFAM_03248 | Yes | 9 | 4 | |
| AG280_7_CGC1 | CGCFAM_04663 | Yes | 10 | 1 | |
| AG280_7_CGC23 | CGCFAM_04665 | Yes | 4 | 2 | |
| AG280_7_CGC24 | CGCFAM_04666 | Yes | 5 | 1 | |
| AG280_7_CGC28 | CGCFAM_04667 | Yes | 7 | 1 | |
| AG280_7_CGC17 | CGCFAM_07092 | Yes | 8 | 2 | |
| AG280_7_CGC19 | CGCFAM_07093 | Yes | 13 | 4 | |
| AG280_7_CGC22 | CGCFAM_07094 | Yes | 3 | 2 | |
| AG280_7_CGC3 | CGCFAM_07096 | Yes | 3 | 1 | |
| AG280_7_CGC4 | CGCFAM_07098 | Yes | 3 | 1 | |
| AG280_7_CGC5 | CGCFAM_07099 | Yes | 8 | 2 | |
| AG280_7_CGC7 | CGCFAM_07100 | Yes | 8 | 1 |
Top CAZyme Families