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Cluster: AG280_7_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_124975 k141_124975_1 116 1336 + GH25
pfam k141_124975 k141_124975_2 1542 2555 + Phage_integrase
TC k141_124975 k141_124975_3 3140 4858 - 1.A.11.2.7
TC k141_124975 k141_124975_4 5123 5959 - 3.A.1.132.3
pfam k141_124975 k141_124975_5 6020 7549 - PLDc | PLDc | PLDc_2 | PLDc_2 | PLDc_N
CAZyme k141_124975 k141_124975_6 7758 9548 + GH5_1
CAZyme k141_124975 k141_124975_7 9752 11542 + GH5_1
pfam k141_124975 k141_124975_8 11575 12054 + dCMP_cyt_deam_1 | MafB19-deam
pfam k141_124975 k141_124975_9 12403 13080 + Methyltransf_4 | Methyltransf_25
CAZyme k141_124975 k141_124975_10 13115 16582 + GH59
Gene ID: k141_124975_1
Type: CAZyme
Location: 116 - 1336 (+)
Gene ID: k141_124975_2
Type: pfam
Location: 1542 - 2555 (+)
Gene ID: k141_124975_3
Type: TC
Location: 3140 - 4858 (-)
Gene ID: k141_124975_4
Type: TC
Location: 5123 - 5959 (-)
Gene ID: k141_124975_5
Type: pfam
Location: 6020 - 7549 (-)
Gene ID: k141_124975_6
Type: CAZyme
Location: 7758 - 9548 (+)
Gene ID: k141_124975_7
Type: CAZyme
Location: 9752 - 11542 (+)
Gene ID: k141_124975_8
Type: pfam
Location: 11575 - 12054 (+)
Gene ID: k141_124975_9
Type: pfam
Location: 12403 - 13080 (+)
Gene ID: k141_124975_10
Type: CAZyme
Location: 13115 - 16582 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_124975_8 vegan > omnivore 2.20254 0.00268
k141_124975_9 vegan > omnivore 1.55520 0.00268

🧭 Explore Read Mapping of CGC

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