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Cluster: AG280_7_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_124636 k141_124636_61 64672 65634 - GH26
TF k141_124636 k141_124636_62 65811 66821 + LacI
STP k141_124636 k141_124636_63 67154 68521 + SBP_bac_1
TC k141_124636 k141_124636_64 68543 69493 + 3.A.1.1.7
TC k141_124636 k141_124636_65 69490 70362 + 3.A.1.1.47
CAZyme k141_124636 k141_124636_66 70633 71652 + GH130_2
pfam k141_124636 k141_124636_67 71689 72858 + GlcNAc_2-epim
CAZyme k141_124636 k141_124636_68 72855 74039 + GH130_1
CAZyme k141_124636 k141_124636_69 74036 75565 + CE20
Gene ID: k141_124636_61
Type: CAZyme
Location: 64672 - 65634 (-)
Gene ID: k141_124636_62
Type: TF
Location: 65811 - 66821 (+)
Gene ID: k141_124636_63
Type: STP
Location: 67154 - 68521 (+)
Gene ID: k141_124636_64
Type: TC
Location: 68543 - 69493 (+)
Gene ID: k141_124636_65
Type: TC
Location: 69490 - 70362 (+)
Gene ID: k141_124636_66
Type: CAZyme
Location: 70633 - 71652 (+)
Gene ID: k141_124636_67
Type: pfam
Location: 71689 - 72858 (+)
Gene ID: k141_124636_68
Type: CAZyme
Location: 72855 - 74039 (+)
Gene ID: k141_124636_69
Type: CAZyme
Location: 74036 - 75565 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_124636_64 vegan > omnivore 1.23490 0.00268

🧭 Explore Read Mapping of CGC

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