Cluster: AG280_7_CGC19
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: AG280_7
- CGC Family ID: CGCFAM_07093
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_165499 | k141_165499_5 | 1265 | 4078 | + | CBM13 | CBM13 | PL1_8 |
| NULL(UNKNOWN) | k141_165499 | k141_165499_6 | 4154 | 4306 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_165499 | k141_165499_7 | 4359 | 5174 | + | 3.A.1.3.1 |
| TC | k141_165499 | k141_165499_8 | 5197 | 5850 | + | 3.A.1.3.14 |
| TC | k141_165499 | k141_165499_9 | 5864 | 6628 | + | 3.A.1.3.6 |
| CAZyme | k141_165499 | k141_165499_10 | 6778 | 7737 | + | GT2 |
| STP | k141_165499 | k141_165499_11 | 7932 | 10175 | + | SpoIIE |
| CAZyme | k141_165499 | k141_165499_12 | 10368 | 12359 | + | CBM48 | GH13_9 |
| pfam | k141_165499 | k141_165499_13 | 12437 | 13639 | + | NTP_transferase | Hexapep_GlmU |
| pfam | k141_165499 | k141_165499_14 | 13654 | 14778 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | k141_165499 | k141_165499_15 | 14900 | 16321 | + | GT5 |
| TF | k141_165499 | k141_165499_16 | 16538 | 16960 | + | Rrf2 |
| TC | k141_165499 | k141_165499_17 | 16957 | 17706 | + | 3.A.1.3.2 |
Gene ID: k141_165499_5
Type: CAZyme
Location: 1265 - 4078 (+)
Type: CAZyme
Location: 1265 - 4078 (+)
Gene ID: k141_165499_6
Type:
Location: 4154 - 4306 (+)
Type:
Location: 4154 - 4306 (+)
Gene ID: k141_165499_7
Type: TC
Location: 4359 - 5174 (+)
Type: TC
Location: 4359 - 5174 (+)
Gene ID: k141_165499_8
Type: TC
Location: 5197 - 5850 (+)
Type: TC
Location: 5197 - 5850 (+)
Gene ID: k141_165499_9
Type: TC
Location: 5864 - 6628 (+)
Type: TC
Location: 5864 - 6628 (+)
Gene ID: k141_165499_10
Type: CAZyme
Location: 6778 - 7737 (+)
Type: CAZyme
Location: 6778 - 7737 (+)
Gene ID: k141_165499_11
Type: STP
Location: 7932 - 10175 (+)
Type: STP
Location: 7932 - 10175 (+)
Gene ID: k141_165499_12
Type: CAZyme
Location: 10368 - 12359 (+)
Type: CAZyme
Location: 10368 - 12359 (+)
Gene ID: k141_165499_13
Type: pfam
Location: 12437 - 13639 (+)
Type: pfam
Location: 12437 - 13639 (+)
Gene ID: k141_165499_14
Type: pfam
Location: 13654 - 14778 (+)
Type: pfam
Location: 13654 - 14778 (+)
Gene ID: k141_165499_15
Type: CAZyme
Location: 14900 - 16321 (+)
Type: CAZyme
Location: 14900 - 16321 (+)
Gene ID: k141_165499_16
Type: TF
Location: 16538 - 16960 (+)
Type: TF
Location: 16538 - 16960 (+)
Gene ID: k141_165499_17
Type: TC
Location: 16957 - 17706 (+)
Type: TC
Location: 16957 - 17706 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp902464115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_165499_13 | vegan > omnivore | 2.19467 | 0.00268 |
| k141_165499_13 | vegetarian > omnivore | 1.49866 | 0.00430 |
| k141_165499_17 | vegan > omnivore | 2.93480 | 0.00193 |
| k141_165499_17 | vegetarian > omnivore | 2.05020 | 0.00430 |