Cluster: AG280_7_CGC27
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: AG280_7
- CGC Family ID: CGCFAM_03247
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_42245 | k141_42245_4 | 2960 | 4942 | - | GH31_1 |
| TF | k141_42245 | k141_42245_5 | 5075 | 5953 | + | HTH_AraC | HTH_AraC |
| TC | k141_42245 | k141_42245_6 | 6044 | 7048 | + | 8.A.5.1.6 |
| TC | k141_42245 | k141_42245_7 | 7241 | 9517 | + | 3.A.3.23.2 |
| STP | k141_42245 | k141_42245_8 | 9567 | 11003 | + | HATPase_c | HisKA |
| TF | k141_42245 | k141_42245_9 | 11000 | 11686 | + | Trans_reg_C |
| TC | k141_42245 | k141_42245_10 | 11701 | 12564 | + | 2.A.7.2.1 |
Gene ID: k141_42245_4
Type: CAZyme
Location: 2960 - 4942 (-)
Type: CAZyme
Location: 2960 - 4942 (-)
Gene ID: k141_42245_5
Type: TF
Location: 5075 - 5953 (+)
Type: TF
Location: 5075 - 5953 (+)
Gene ID: k141_42245_6
Type: TC
Location: 6044 - 7048 (+)
Type: TC
Location: 6044 - 7048 (+)
Gene ID: k141_42245_7
Type: TC
Location: 7241 - 9517 (+)
Type: TC
Location: 7241 - 9517 (+)
Gene ID: k141_42245_8
Type: STP
Location: 9567 - 11003 (+)
Type: STP
Location: 9567 - 11003 (+)
Gene ID: k141_42245_9
Type: TF
Location: 11000 - 11686 (+)
Type: TF
Location: 11000 - 11686 (+)
Gene ID: k141_42245_10
Type: TC
Location: 11701 - 12564 (+)
Type: TC
Location: 11701 - 12564 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp902464115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_42245_4 | vegan > omnivore | 1.34708 | 0.00268 |