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Genome Details

Selected Rep_genome_ID: AG252_6
Total Genomes Found: 10
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
AG252_6 5,917,573 99.32% 0% NA Africa H3AfricaPhase2
B36.bin_31 6,850,013 99.32% 2.82% China(Inner Mongolia) Asia IMGG
CGMR047560 5,489,566 98.57% 0% China Asia CGMR
GCA_021639745.1_ASM2163974v1_genomic 5,534,904 96.21% 0% NA Africa H3AfricaPhase1
SPMP103_bin.12 5,916,524 93.25% 1.24% Singapore Asia SPMP
SPMP27_bin.78 5,584,434 97.89% 3.2% Singapore Asia SPMP
SPMP33_bin.10 5,212,127 92.58% 0.87% Singapore Asia SPMP
SPMP65_bin.55 5,376,571 95.86% 0.56% Singapore Asia SPMP
SPMP85_bin.35 5,486,391 93.67% 1.89% Singapore Asia SPMP
SPMP90_bin.42 5,761,189 94.8% 0.56% Singapore Asia SPMP
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
AG252_6_CGC35 CGCFAM_00018 Yes 11 4
AG252_6_CGC13 CGCFAM_00042 Yes 4 1 beta-glucan
AG252_6_CGC31 CGCFAM_00063 Yes 3 1
AG252_6_CGC51 CGCFAM_00094 Yes 4 1 beta-mannan/fructan
AG252_6_CGC34 CGCFAM_00211 Yes 3 1
AG252_6_CGC3 CGCFAM_00277 Yes 10 1
AG252_6_CGC28 CGCFAM_00342 Yes 5 2
AG252_6_CGC38 CGCFAM_00345 Yes 7 1
AG252_6_CGC43 CGCFAM_00405 Yes 6 2 host glycan
AG252_6_CGC18 CGCFAM_00563 Yes 11 6
AG252_6_CGC16 CGCFAM_00689 Yes 4 1
AG252_6_CGC39 CGCFAM_00865 Yes 4 2
AG252_6_CGC40 CGCFAM_00872 Yes 20 3
AG252_6_CGC1 CGCFAM_00935 Yes 5 1
AG252_6_CGC23 CGCFAM_01109 Yes 4 1
AG252_6_CGC36 CGCFAM_01322 Yes 8 1
AG252_6_CGC29 CGCFAM_01565 Yes 4 1
AG252_6_CGC41 CGCFAM_02000 Yes 3 1
AG252_6_CGC25 CGCFAM_02502 Yes 8 1
AG252_6_CGC42 CGCFAM_02504 Yes 13 1
AG252_6_CGC20 CGCFAM_03052 Yes 5 2
AG252_6_CGC33 CGCFAM_04210 Yes 4 1
AG252_6_CGC9 CGCFAM_04452 Yes 12 3
AG252_6_CGC8 CGCFAM_04558 Yes 3 1
AG252_6_CGC44 CGCFAM_04645 Yes 21 2
Top CAZyme Families