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Cluster: AG252_6_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_65742 k141_65742_199 224152 226038 - 8.A.59.2.1
TF k141_65742 k141_65742_200 226035 226787 - HTH_AraC
STP k141_65742 k141_65742_201 227024 228391 + SBP_bac_1
TC k141_65742 k141_65742_202 228492 229391 + 3.A.1.1.11
TC k141_65742 k141_65742_203 229401 230240 + 3.A.1.1.11
pfam k141_65742 k141_65742_204 230287 231321 + Lipase_GDSL_2 | Lipase_GDSL_3
CAZyme k141_65742 k141_65742_205 231326 232960 + CBM91 | GH43_10
Gene ID: k141_65742_199
Type: TC
Location: 224152 - 226038 (-)
Gene ID: k141_65742_200
Type: TF
Location: 226035 - 226787 (-)
Gene ID: k141_65742_201
Type: STP
Location: 227024 - 228391 (+)
Gene ID: k141_65742_202
Type: TC
Location: 228492 - 229391 (+)
Gene ID: k141_65742_203
Type: TC
Location: 229401 - 230240 (+)
Gene ID: k141_65742_204
Type: pfam
Location: 230287 - 231321 (+)
Gene ID: k141_65742_205
Type: CAZyme
Location: 231326 - 232960 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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