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Cluster: AG252_6_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_16017 k141_16017_95 105495 107765 - GH2
TC k141_16017 k141_16017_96 107779 108609 - 3.A.1.1.18
TC k141_16017 k141_16017_97 108599 109498 - 3.A.1.1.32
STP k141_16017 k141_16017_98 109509 110924 - SBP_bac_1
TF k141_16017 k141_16017_99 111004 112572 - HTH_AraC | HTH_AraC
TC k141_16017 k141_16017_100 112590 114521 - 8.A.59.2.1
pfam k141_16017 k141_16017_101 114703 116067 + MatE | MatE
pfam k141_16017 k141_16017_102 116064 116879 + AP_endonuc_2
TC k141_16017 k141_16017_103 117034 117930 + 3.A.1.1.45
TC k141_16017 k141_16017_104 117930 118760 + 3.A.1.1.45
Gene ID: k141_16017_95
Type: CAZyme
Location: 105495 - 107765 (-)
Gene ID: k141_16017_96
Type: TC
Location: 107779 - 108609 (-)
Gene ID: k141_16017_97
Type: TC
Location: 108599 - 109498 (-)
Gene ID: k141_16017_98
Type: STP
Location: 109509 - 110924 (-)
Gene ID: k141_16017_99
Type: TF
Location: 111004 - 112572 (-)
Gene ID: k141_16017_100
Type: TC
Location: 112590 - 114521 (-)
Gene ID: k141_16017_101
Type: pfam
Location: 114703 - 116067 (+)
Gene ID: k141_16017_102
Type: pfam
Location: 116064 - 116879 (+)
Gene ID: k141_16017_103
Type: TC
Location: 117034 - 117930 (+)
Gene ID: k141_16017_104
Type: TC
Location: 117930 - 118760 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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