dbCAN Logo

Cluster: AG252_6_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_60206 k141_60206_212 242378 243820 - CE4
STP k141_60206 k141_60206_213 243817 244395 - HD
NULL(UNKNOWN) k141_60206 k141_60206_214 244606 245709 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_60206 k141_60206_215 245834 246853 - 2.A.56.1.5
pfam k141_60206 k141_60206_216 246921 247406 - YcxB
TC k141_60206 k141_60206_217 247513 248808 - 2.A.56.1.5
pfam k141_60206 k141_60206_218 248808 249332 - DctQ
TC k141_60206 k141_60206_219 249405 250535 - 2.A.56.1.6
TF k141_60206 k141_60206_220 250727 251524 - HTH_AraC | HTH_AraC
TC k141_60206 k141_60206_221 251536 253128 - 8.A.59.2.1
CAZyme k141_60206 k141_60206_222 253249 256236 - CBM48 | GH13_9
pfam k141_60206 k141_60206_223 256306 256770 - MGS
pfam k141_60206 k141_60206_224 256787 257683 - FAA_hydrolase
TC k141_60206 k141_60206_225 257806 260541 - 3.A.3.2.21
peptidase k141_60206 k141_60206_226 260783 261760 - M20.UNW
CAZyme k141_60206 k141_60206_227 261840 263867 - GH13_11
TC k141_60206 k141_60206_228 264103 265950 - 3.A.1.120.6
pfam k141_60206 k141_60206_229 265963 266718 - Exo_endo_phos
pfam k141_60206 k141_60206_230 266795 267280 - LuxS
TC k141_60206 k141_60206_231 267372 269009 - 3.A.1.121.4
Gene ID: k141_60206_212
Type: CAZyme
Location: 242378 - 243820 (-)
Gene ID: k141_60206_213
Type: STP
Location: 243817 - 244395 (-)
Gene ID: k141_60206_214
Type:
Location: 244606 - 245709 (+)
Gene ID: k141_60206_215
Type: TC
Location: 245834 - 246853 (-)
Gene ID: k141_60206_216
Type: pfam
Location: 246921 - 247406 (-)
Gene ID: k141_60206_217
Type: TC
Location: 247513 - 248808 (-)
Gene ID: k141_60206_218
Type: pfam
Location: 248808 - 249332 (-)
Gene ID: k141_60206_219
Type: TC
Location: 249405 - 250535 (-)
Gene ID: k141_60206_220
Type: TF
Location: 250727 - 251524 (-)
Gene ID: k141_60206_221
Type: TC
Location: 251536 - 253128 (-)
Gene ID: k141_60206_222
Type: CAZyme
Location: 253249 - 256236 (-)
Gene ID: k141_60206_223
Type: pfam
Location: 256306 - 256770 (-)
Gene ID: k141_60206_224
Type: pfam
Location: 256787 - 257683 (-)
Gene ID: k141_60206_225
Type: TC
Location: 257806 - 260541 (-)
Gene ID: k141_60206_226
Type: peptidase
Location: 260783 - 261760 (-)
Gene ID: k141_60206_227
Type: CAZyme
Location: 261840 - 263867 (-)
Gene ID: k141_60206_228
Type: TC
Location: 264103 - 265950 (-)
Gene ID: k141_60206_229
Type: pfam
Location: 265963 - 266718 (-)
Gene ID: k141_60206_230
Type: pfam
Location: 266795 - 267280 (-)
Gene ID: k141_60206_231
Type: TC
Location: 267372 - 269009 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List