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Cluster: AG252_6_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_32364 k141_32364_20 19015 19848 - CE4
CAZyme k141_32364 k141_32364_21 19845 20744 - CE4
TC k141_32364 k141_32364_22 21062 21979 + 3.A.1.3.27
TC k141_32364 k141_32364_23 22005 22673 + 3.A.1.3.15
TC k141_32364 k141_32364_24 22657 23379 + 3.A.1.3.15
TC k141_32364 k141_32364_25 23589 24890 - 2.A.56.1.5
pfam k141_32364 k141_32364_26 24890 25390 - DctQ
TC k141_32364 k141_32364_27 25405 26430 - 2.A.56.1.2
CAZyme k141_32364 k141_32364_28 26498 28999 - GH31_2
TF k141_32364 k141_32364_29 29232 30050 + HTH_AraC | HTH_AraC
pfam k141_32364 k141_32364_30 30031 31218 + Acyl_transf_3
TC k141_32364 k141_32364_31 31167 32204 - 9.B.34.1.2
Gene ID: k141_32364_20
Type: CAZyme
Location: 19015 - 19848 (-)
Gene ID: k141_32364_21
Type: CAZyme
Location: 19845 - 20744 (-)
Gene ID: k141_32364_22
Type: TC
Location: 21062 - 21979 (+)
Gene ID: k141_32364_23
Type: TC
Location: 22005 - 22673 (+)
Gene ID: k141_32364_24
Type: TC
Location: 22657 - 23379 (+)
Gene ID: k141_32364_25
Type: TC
Location: 23589 - 24890 (-)
Gene ID: k141_32364_26
Type: pfam
Location: 24890 - 25390 (-)
Gene ID: k141_32364_27
Type: TC
Location: 25405 - 26430 (-)
Gene ID: k141_32364_28
Type: CAZyme
Location: 26498 - 28999 (-)
Gene ID: k141_32364_29
Type: TF
Location: 29232 - 30050 (+)
Gene ID: k141_32364_30
Type: pfam
Location: 30031 - 31218 (+)
Gene ID: k141_32364_31
Type: TC
Location: 31167 - 32204 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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