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Genome Details

Selected Rep_genome_ID: AG078_26
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→
Species
Prevotella sp900540375
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
A112.bin_13 3,685,687 98.9% 0.51% China(Inner Mongolia) Asia IMGG
AG078_26 3,547,726 99.32% 0.34% NA Africa H3AfricaPhase2
GCA_021618705.1_ASM2161870v1_genomic 3,287,407 93.13% 1.35% NA Africa H3AfricaPhase1
Rep_246 3,286,334 98.6487% 1.01351% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
AG078_26_CGC22 CGCFAM_00001 Yes 7 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
AG078_26_CGC36 CGCFAM_00001 Yes 6 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
AG078_26_CGC44 CGCFAM_00001 Yes 4 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
AG078_26_CGC12 CGCFAM_00032 Yes 4 2
AG078_26_CGC2 CGCFAM_00033 Yes 3 2
AG078_26_CGC24 CGCFAM_00034 Yes 6 4
AG078_26_CGC39 CGCFAM_00043 Yes 18 3 alpha-glucan
AG078_26_CGC4 CGCFAM_00108 Yes 6 3 pectin
AG078_26_CGC11 CGCFAM_00116 Yes 9 3 xylan/beta-glucan
AG078_26_CGC27 CGCFAM_00146 Yes 5 4
AG078_26_CGC29 CGCFAM_00148 Yes 3 1
AG078_26_CGC14 CGCFAM_00181 Yes 7 1
AG078_26_CGC30 CGCFAM_00186 Yes 3 1
AG078_26_CGC33 CGCFAM_00192 Yes 3 1
AG078_26_CGC21 CGCFAM_00254 Yes 4 2
AG078_26_CGC10 CGCFAM_00266 Yes 5 2
AG078_26_CGC25 CGCFAM_00595 Yes 6 2
AG078_26_CGC26 CGCFAM_01475 Yes 9 7 pectin
AG078_26_CGC31 CGCFAM_01484 Yes 12 6
AG078_26_CGC16 CGCFAM_01603 Yes 4 1
AG078_26_CGC34 CGCFAM_01606 Yes 3 1
AG078_26_CGC35 CGCFAM_01607 Yes 8 3
AG078_26_CGC47 CGCFAM_01845 Yes 6 2
AG078_26_CGC8 CGCFAM_02281 Yes 11 5
AG078_26_CGC38 CGCFAM_02388 Yes 6 1
Top CAZyme Families