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Cluster: AG078_26_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_10199 k141_10199_30 44620 45801 - CE12
CAZyme k141_10199 k141_10199_31 45840 48257 - GH2
CAZyme k141_10199 k141_10199_32 48302 49609 - GH28
CAZyme k141_10199 k141_10199_33 49681 53214 - GH105 | GH106
CAZyme k141_10199 k141_10199_34 53227 54849 - CE12 | CE12
CAZyme k141_10199 k141_10199_35 54909 56996 - PL11_1
CAZyme k141_10199 k141_10199_36 56993 61549 - PL11_1
TF k141_10199 k141_10199_37 61730 66016 + HTH_AraC
TC k141_10199 k141_10199_38 66287 69490 + 1.B.14.6.1
Gene ID: k141_10199_30
Type: CAZyme
Location: 44620 - 45801 (-)
Gene ID: k141_10199_31
Type: CAZyme
Location: 45840 - 48257 (-)
Gene ID: k141_10199_32
Type: CAZyme
Location: 48302 - 49609 (-)
Gene ID: k141_10199_33
Type: CAZyme
Location: 49681 - 53214 (-)
Gene ID: k141_10199_34
Type: CAZyme
Location: 53227 - 54849 (-)
Gene ID: k141_10199_35
Type: CAZyme
Location: 54909 - 56996 (-)
Gene ID: k141_10199_36
Type: CAZyme
Location: 56993 - 61549 (-)
Gene ID: k141_10199_37
Type: TF
Location: 61730 - 66016 (+)
Gene ID: k141_10199_38
Type: TC
Location: 66287 - 69490 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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