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Cluster: AG078_26_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_53044 k141_53044_14 11002 12942 - 1.B.14.4.3
TC k141_53044 k141_53044_15 13161 13826 - 5.A.3.1.2
pfam k141_53044 k141_53044_16 13839 14342 - Nitrate_red_del
TC k141_53044 k141_53044_17 14358 15869 - 5.A.3.1.2
TC k141_53044 k141_53044_18 15871 17256 - 5.A.3.1.2
TC k141_53044 k141_53044_19 17253 19562 - 5.A.3.1.1
TC k141_53044 k141_53044_20 19583 20878 - 2.A.1.8.15
pfam k141_53044 k141_53044_21 20906 21550 - NTP_transf_3
NULL(UNKNOWN) k141_53044 k141_53044_22 21563 22024 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_53044 k141_53044_23 22478 25057 + GH3
pfam k141_53044 k141_53044_24 25733 27166 - SSF
CAZyme k141_53044 k141_53044_25 27373 29520 - GH97
CAZyme k141_53044 k141_53044_26 29567 31351 - GH66
pfam k141_53044 k141_53044_27 31392 32888 - SusE | SusF_SusE | SusF_SusE
TC k141_53044 k141_53044_28 32928 34418 - 8.A.46.1.3
TC k141_53044 k141_53044_29 34427 37429 - 1.B.14.6.1
pfam k141_53044 k141_53044_30 37660 39309 - DUF6377
TC k141_53044 k141_53044_31 39338 41074 - 9.B.174.1.1
Gene ID: k141_53044_14
Type: TC
Location: 11002 - 12942 (-)
Gene ID: k141_53044_15
Type: TC
Location: 13161 - 13826 (-)
Gene ID: k141_53044_16
Type: pfam
Location: 13839 - 14342 (-)
Gene ID: k141_53044_17
Type: TC
Location: 14358 - 15869 (-)
Gene ID: k141_53044_18
Type: TC
Location: 15871 - 17256 (-)
Gene ID: k141_53044_19
Type: TC
Location: 17253 - 19562 (-)
Gene ID: k141_53044_20
Type: TC
Location: 19583 - 20878 (-)
Gene ID: k141_53044_21
Type: pfam
Location: 20906 - 21550 (-)
Gene ID: k141_53044_22
Type:
Location: 21563 - 22024 (-)
Gene ID: k141_53044_23
Type: CAZyme
Location: 22478 - 25057 (+)
Gene ID: k141_53044_24
Type: pfam
Location: 25733 - 27166 (-)
Gene ID: k141_53044_25
Type: CAZyme
Location: 27373 - 29520 (-)
Gene ID: k141_53044_26
Type: CAZyme
Location: 29567 - 31351 (-)
Gene ID: k141_53044_27
Type: pfam
Location: 31392 - 32888 (-)
Gene ID: k141_53044_28
Type: TC
Location: 32928 - 34418 (-)
Gene ID: k141_53044_29
Type: TC
Location: 34427 - 37429 (-)
Gene ID: k141_53044_30
Type: pfam
Location: 37660 - 39309 (-)
Gene ID: k141_53044_31
Type: TC
Location: 39338 - 41074 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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