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Cluster: AG078_26_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_135724 k141_135724_5 4272 5915 - GH29
CAZyme k141_135724 k141_135724_6 6140 9145 - GH98
NULL(UNKNOWN) k141_135724 k141_135724_7 9260 10267 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_135724 k141_135724_8 10430 12127 - GH10
pfam k141_135724 k141_135724_9 12183 13166 - BT_3987-like_N | DUF5627
pfam k141_135724 k141_135724_10 13295 15067 - SusD_RagB | SusD-like_3
TC k141_135724 k141_135724_11 15092 17911 - 1.B.14.6.1
pfam k141_135724 k141_135724_12 17957 19834 - SusD_RagB | SusD-like_3
TC k141_135724 k141_135724_13 19890 22982 - 1.B.14.6.1
Gene ID: k141_135724_5
Type: CAZyme
Location: 4272 - 5915 (-)
Gene ID: k141_135724_6
Type: CAZyme
Location: 6140 - 9145 (-)
Gene ID: k141_135724_7
Type:
Location: 9260 - 10267 (-)
Gene ID: k141_135724_8
Type: CAZyme
Location: 10430 - 12127 (-)
Gene ID: k141_135724_9
Type: pfam
Location: 12183 - 13166 (-)
Gene ID: k141_135724_10
Type: pfam
Location: 13295 - 15067 (-)
Gene ID: k141_135724_11
Type: TC
Location: 15092 - 17911 (-)
Gene ID: k141_135724_12
Type: pfam
Location: 17957 - 19834 (-)
Gene ID: k141_135724_13
Type: TC
Location: 19890 - 22982 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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