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Cluster: AG078_26_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_129329 k141_129329_12 12561 14009 - GH57
CAZyme k141_129329 k141_129329_13 14069 15334 - GT4
CAZyme k141_129329 k141_129329_14 15353 17296 - GH133
TC k141_129329 k141_129329_15 18225 21212 + 1.B.14.6.1
pfam k141_129329 k141_129329_16 21234 22961 + SusD_RagB | SusD-like_3
CAZyme k141_129329 k141_129329_17 23119 24897 + GH13_44
pfam k141_129329 k141_129329_18 25081 26034 - IPPT | IPT
TF k141_129329 k141_129329_19 26185 29655 - HTH_AraC
CAZyme k141_129329 k141_129329_20 29778 30755 - GH16_3
TC k141_129329 k141_129329_21 30767 32371 - 8.A.46.1.3
TC k141_129329 k141_129329_22 32386 35388 - 1.B.14.6.1
CAZyme k141_129329 k141_129329_23 35461 36954 - GH53
Gene ID: k141_129329_12
Type: CAZyme
Location: 12561 - 14009 (-)
Gene ID: k141_129329_13
Type: CAZyme
Location: 14069 - 15334 (-)
Gene ID: k141_129329_14
Type: CAZyme
Location: 15353 - 17296 (-)
Gene ID: k141_129329_15
Type: TC
Location: 18225 - 21212 (+)
Gene ID: k141_129329_16
Type: pfam
Location: 21234 - 22961 (+)
Gene ID: k141_129329_17
Type: CAZyme
Location: 23119 - 24897 (+)
Gene ID: k141_129329_18
Type: pfam
Location: 25081 - 26034 (-)
Gene ID: k141_129329_19
Type: TF
Location: 26185 - 29655 (-)
Gene ID: k141_129329_20
Type: CAZyme
Location: 29778 - 30755 (-)
Gene ID: k141_129329_21
Type: TC
Location: 30767 - 32371 (-)
Gene ID: k141_129329_22
Type: TC
Location: 32386 - 35388 (-)
Gene ID: k141_129329_23
Type: CAZyme
Location: 35461 - 36954 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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