Genome Details
Selected Rep_genome_ID: A43.CMAG_3
Total Genomes Found: 11
Total Genomes Found: 11
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-103
Species
CAG-103 sp000432375
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| A43.CMAG_3 | 2,295,035 | 93.29% | 0% | China(Inner Mongolia) | Asia | IMGG |
| AG339_bin.4 | 1,959,304 | 93.29% | 0% | NA | Africa | H3AfricaPhase2 |
| CGMR053853 | 1,934,154 | 93.29% | 0% | China | Asia | CGMR |
| HRGMv2_2709 | 2,356,266 | 93.28% | 0% | South Korea | Asia | HRGM |
| MGYG000004526 | 1,961,384 | 93.96% | 0% | Israel | Asia | UHGG |
| MurphyR_2019_SRR7351712_bin.16 | 1,819,728 | 91.94% | 0% | New_Zealand | Oceania | ELGG |
| Rep_3180 | 2,128,383 | 93.2886% | 0% | NA | NA | WIS |
| SPMP28_bin.8 | 2,081,686 | 91.95% | 0% | Singapore | Asia | SPMP |
| SPMP79_bin.10 | 1,833,387 | 90.27% | 0% | Singapore | Asia | SPMP |
| SPMP93_bin.89 | 1,876,236 | 91.5% | 0% | Singapore | Asia | SPMP |
| SPMP97_bin.110 | 1,958,066 | 92.43% | 0.71% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| A43.CMAG_3_CGC6 | CGCFAM_00132 | Yes | 5 | 2 | |
| A43.CMAG_3_CGC14 | CGCFAM_00173 | Yes | 7 | 1 | |
| A43.CMAG_3_CGC1 | CGCFAM_00455 | Yes | 3 | 1 | |
| A43.CMAG_3_CGC8 | CGCFAM_00737 | Yes | 4 | 1 | |
| A43.CMAG_3_CGC7 | CGCFAM_00761 | Yes | 4 | 2 | |
| A43.CMAG_3_CGC2 | CGCFAM_01921 | Yes | 6 | 1 | |
| A43.CMAG_3_CGC12 | CGCFAM_02349 | Yes | 3 | 1 | |
| A43.CMAG_3_CGC5 | CGCFAM_03018 | Yes | 5 | 1 | |
| A43.CMAG_3_CGC11 | CGCFAM_03114 | Yes | 11 | 1 | |
| A43.CMAG_3_CGC3 | CGCFAM_03115 | Yes | 8 | 1 | |
| A43.CMAG_3_CGC10 | CGCFAM_06751 | Yes | 3 | 1 |
Top CAZyme Families