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Cluster: A43.CMAG_3_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A43_contig_223 A43_contig_223_614 636516 639158 + 3.A.3.2.21
CAZyme A43_contig_223 A43_contig_223_615 639214 640077 + CE4
TC A43_contig_223 A43_contig_223_616 640209 640967 + 3.A.1.17.8
TC A43_contig_223 A43_contig_223_617 640960 641775 + 3.A.1.17.3
pfam A43_contig_223 A43_contig_223_618 641772 642755 + NMT1 | NMT1_2 | NMT1_2
TC A43_contig_223 A43_contig_223_619 642859 643710 - 3.A.1.24.5
TC A43_contig_223 A43_contig_223_620 643853 644530 - 3.A.1.24.5
TC A43_contig_223 A43_contig_223_621 644523 645527 - 3.A.1.24.2
Gene ID: A43_contig_223_614
Type: TC
Location: 636516 - 639158 (+)
Gene ID: A43_contig_223_615
Type: CAZyme
Location: 639214 - 640077 (+)
Gene ID: A43_contig_223_616
Type: TC
Location: 640209 - 640967 (+)
Gene ID: A43_contig_223_617
Type: TC
Location: 640960 - 641775 (+)
Gene ID: A43_contig_223_618
Type: pfam
Location: 641772 - 642755 (+)
Gene ID: A43_contig_223_619
Type: TC
Location: 642859 - 643710 (-)
Gene ID: A43_contig_223_620
Type: TC
Location: 643853 - 644530 (-)
Gene ID: A43_contig_223_621
Type: TC
Location: 644523 - 645527 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
A43_contig_223_615 vegetarian > omnivore 1.05029 0.00012
A43_contig_223_617 vegetarian > omnivore 1.07303 0.00012

🧭 Explore Read Mapping of CGC

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