Cluster: A43.CMAG_3_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A43.CMAG_3
- CGC Family ID: CGCFAM_03018
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A43_contig_223 | A43_contig_223_850 | 903882 | 904499 | + | 9.B.18.1.3 |
| pfam | A43_contig_223 | A43_contig_223_851 | 904532 | 905335 | + | Wzz |
| TC | A43_contig_223 | A43_contig_223_852 | 905298 | 906062 | + | 8.A.3.2.1 |
| pfam | A43_contig_223 | A43_contig_223_853 | 906049 | 906699 | + | CpsB_CapC |
| CAZyme | A43_contig_223 | A43_contig_223_854 | 906722 | 907555 | + | GT2 |
Gene ID: A43_contig_223_850
Type: TC
Location: 903882 - 904499 (+)
Type: TC
Location: 903882 - 904499 (+)
Gene ID: A43_contig_223_851
Type: pfam
Location: 904532 - 905335 (+)
Type: pfam
Location: 904532 - 905335 (+)
Gene ID: A43_contig_223_852
Type: TC
Location: 905298 - 906062 (+)
Type: TC
Location: 905298 - 906062 (+)
Gene ID: A43_contig_223_853
Type: pfam
Location: 906049 - 906699 (+)
Type: pfam
Location: 906049 - 906699 (+)
Gene ID: A43_contig_223_854
Type: CAZyme
Location: 906722 - 907555 (+)
Type: CAZyme
Location: 906722 - 907555 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-103
Species
CAG-103 sp000432375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A43_contig_223_850 | vegetarian > vegan | 1.14793 | 0.00085 |
| A43_contig_223_851 | vegetarian > vegan | 1.33591 | 0.00085 |
| A43_contig_223_852 | vegetarian > vegan | 1.41149 | 0.00085 |
| A43_contig_223_853 | vegetarian > vegan | 1.37240 | 0.00085 |