Cluster: A43.CMAG_3_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A43.CMAG_3
- CGC Family ID: CGCFAM_01921
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A43_contig_223 | A43_contig_223_432 | 475246 | 476289 | + | 3.A.1.34.1 |
| TC | A43_contig_223 | A43_contig_223_433 | 476318 | 477250 | + | 3.A.1.34.1 |
| TC | A43_contig_223 | A43_contig_223_434 | 477243 | 478061 | + | 3.A.1.34.1 |
| pfam | A43_contig_223 | A43_contig_223_435 | 478307 | 479272 | - | DUF1980_C |
| TC | A43_contig_223 | A43_contig_223_436 | 479265 | 480392 | - | 9.B.10.1.1 |
| CAZyme | A43_contig_223 | A43_contig_223_437 | 480533 | 481741 | + | GH3 |
Gene ID: A43_contig_223_432
Type: TC
Location: 475246 - 476289 (+)
Type: TC
Location: 475246 - 476289 (+)
Gene ID: A43_contig_223_433
Type: TC
Location: 476318 - 477250 (+)
Type: TC
Location: 476318 - 477250 (+)
Gene ID: A43_contig_223_434
Type: TC
Location: 477243 - 478061 (+)
Type: TC
Location: 477243 - 478061 (+)
Gene ID: A43_contig_223_435
Type: pfam
Location: 478307 - 479272 (-)
Type: pfam
Location: 478307 - 479272 (-)
Gene ID: A43_contig_223_436
Type: TC
Location: 479265 - 480392 (-)
Type: TC
Location: 479265 - 480392 (-)
Gene ID: A43_contig_223_437
Type: CAZyme
Location: 480533 - 481741 (+)
Type: CAZyme
Location: 480533 - 481741 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-103
Species
CAG-103 sp000432375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A43_contig_223_437 | vegetarian > omnivore | 1.05240 | 0.00012 |