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Genome Details

Selected Rep_genome_ID: A31.CMAG_2
Total Genomes Found: 22
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Lactobacillaceae
→
Genus
Ligilactobacillus
→
Species
Ligilactobacillus ruminis
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
A31.CMAG_2 2,237,076 98.95% 0% China(Inner Mongolia) Asia IMGG
CGMR054570 1,756,636 98.95% 0% China Asia CGMR
KY132_maxbin.002 2,176,501 99.48% 0% NA Africa H3AfricaPhase2
Rep_1042 2,080,999 91.2391% 0.52356% NA NA WIS
SPMP01_bin.48 2,115,354 98.25% 0% Singapore Asia SPMP
SPMP02_bin.10 2,155,281 97.73% 0.52% Singapore Asia SPMP
SPMP11_bin.6 2,045,413 95.68% 0% Singapore Asia SPMP
SPMP14_bin.76 1,854,955 93.02% 0% Singapore Asia SPMP
SPMP15_bin.40 2,176,999 97.51% 0.52% Singapore Asia SPMP
SPMP22_bin.13 2,118,234 97.89% 4.19% Singapore Asia SPMP
SPMP38_bin.27 2,229,300 98.69% 3.84% Singapore Asia SPMP
SPMP45_bin.18 2,244,563 98.15% 0.52% Singapore Asia SPMP
SPMP48_bin.106 2,112,507 98.67% 0.26% Singapore Asia SPMP
SPMP62_bin.5 2,049,622 93.76% 1.57% Singapore Asia SPMP
SPMP63_bin.47 2,276,065 98.3% 0.52% Singapore Asia SPMP
SPMP71_bin.78 2,119,551 98.82% 0% Singapore Asia SPMP
SPMP76_bin.4 2,265,171 97.91% 1.44% Singapore Asia SPMP
SPMP78_bin.51 2,180,684 97.91% 0.52% Singapore Asia SPMP
SPMP82_bin.69 2,211,972 95.55% 0% Singapore Asia SPMP
SPMP83_bin.50 2,063,700 99.48% 0.52% Singapore Asia SPMP
SPMP92_bin.31 2,226,748 98.25% 0.79% Singapore Asia SPMP
SPMP93_bin.5 2,050,803 98.95% 0% Singapore Asia SPMP
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
A31.CMAG_2_CGC5 CGCFAM_00004 Yes 11 4 alpha-glucan
A31.CMAG_2_CGC3 CGCFAM_00013 Yes 3 1
A31.CMAG_2_CGC20 CGCFAM_00066 Yes 6 2 beta-mannan
A31.CMAG_2_CGC8 CGCFAM_00113 Yes 6 1
A31.CMAG_2_CGC16 CGCFAM_00169 Yes 5 2
A31.CMAG_2_CGC26 CGCFAM_00255 Yes 7 2
A31.CMAG_2_CGC11 CGCFAM_00264 Yes 3 1
A31.CMAG_2_CGC17 CGCFAM_00348 Yes 14 5
A31.CMAG_2_CGC23 CGCFAM_00510 Yes 6 1
A31.CMAG_2_CGC4 CGCFAM_00979 Yes 3 1
A31.CMAG_2_CGC21 CGCFAM_01559 Yes 5 2
A31.CMAG_2_CGC6 CGCFAM_01907 Yes 6 2
A31.CMAG_2_CGC13 CGCFAM_06717 Yes 10 1
Top CAZyme Families