Cluster: A31.CMAG_2_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A31.CMAG_2
- CGC Family ID: CGCFAM_00510
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A31_contig_998 | A31_contig_998_1846 | 1970950 | 1972935 | + | 3.A.1.122.13 |
| pfam | A31_contig_998 | A31_contig_998_1847 | 1973210 | 1973680 | + | tRNA_edit |
| TC | A31_contig_998 | A31_contig_998_1848 | 1974285 | 1974872 | + | 2.A.87.2.1 |
| CAZyme | A31_contig_998 | A31_contig_998_1849 | 1974915 | 1975571 | + | GH73 |
| STP | A31_contig_998 | A31_contig_998_1850 | 1975827 | 1976405 | + | Pribosyltran |
| TC | A31_contig_998 | A31_contig_998_1851 | 1976408 | 1977694 | + | 2.A.40.3.1 |
Gene ID: A31_contig_998_1846
Type: TC
Location: 1970950 - 1972935 (+)
Type: TC
Location: 1970950 - 1972935 (+)
Gene ID: A31_contig_998_1847
Type: pfam
Location: 1973210 - 1973680 (+)
Type: pfam
Location: 1973210 - 1973680 (+)
Gene ID: A31_contig_998_1848
Type: TC
Location: 1974285 - 1974872 (+)
Type: TC
Location: 1974285 - 1974872 (+)
Gene ID: A31_contig_998_1849
Type: CAZyme
Location: 1974915 - 1975571 (+)
Type: CAZyme
Location: 1974915 - 1975571 (+)
Gene ID: A31_contig_998_1850
Type: STP
Location: 1975827 - 1976405 (+)
Type: STP
Location: 1975827 - 1976405 (+)
Gene ID: A31_contig_998_1851
Type: TC
Location: 1976408 - 1977694 (+)
Type: TC
Location: 1976408 - 1977694 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Species
Ligilactobacillus ruminis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.