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Genome Details

Selected Rep_genome_ID: A111.bin_5
Total Genomes Found: 34
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→
Species
Bacteroides uniformis
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
A111.bin_5 4,748,057 99.26% 0% China(Inner Mongolia) Asia IMGG
CGMR015546 3,310,029 90.86% 0% China Asia CGMR
CGMR028573 4,247,883 98.88% 0% China Asia CGMR
DM087_bin.71 4,221,267 98.88% 0% NA Africa H3AfricaPhase2
GCA_021621185.1_ASM2162118v1_genomic 4,689,899 98.12% 1.87% NA Africa H3AfricaPhase1
GCA_021639305.1_ASM2163930v1_genomic 4,584,418 94.35% 0.59% NA Africa H3AfricaPhase1
Rep_477 4,449,557 96.6543% 0% NA NA WIS
SPMP09_bin.16 4,173,058 95.99% 1.86% Singapore Asia SPMP
SPMP106_bin.58 4,093,743 97.4% 0.59% Singapore Asia SPMP
SPMP11_bin.38 4,376,175 97.96% 1.98% Singapore Asia SPMP
SPMP12_bin.59 4,226,150 92.99% 2.54% Singapore Asia SPMP
SPMP15_bin.8 3,764,517 91.38% 0.74% Singapore Asia SPMP
SPMP27_bin.8 4,217,639 97.49% 1.98% Singapore Asia SPMP
SPMP28_bin.125 4,237,853 96.24% 0.62% Singapore Asia SPMP
SPMP30_bin.74 3,791,500 98.7% 0.88% Singapore Asia SPMP
SPMP33_bin.64 4,291,739 94.99% 3.35% Singapore Asia SPMP
SPMP35_bin.44 4,276,736 96.16% 0.93% Singapore Asia SPMP
SPMP36_bin.14 4,106,443 95.7% 1.21% Singapore Asia SPMP
SPMP37_bin.25 4,303,237 96.34% 2.23% Singapore Asia SPMP
SPMP38_bin.79 4,102,096 96.89% 0.18% Singapore Asia SPMP
SPMP40_bin.78 4,552,169 97.26% 1.49% Singapore Asia SPMP
SPMP43_bin.23 3,996,320 91.69% 1.16% Singapore Asia SPMP
SPMP44_bin.75 4,179,973 96.08% 1.12% Singapore Asia SPMP
SPMP47_bin.18 3,915,624 96.84% 0.93% Singapore Asia SPMP
SPMP50_bin.51 4,037,402 93.29% 0.5% Singapore Asia SPMP
SPMP63_bin.64 4,056,939 91.07% 0.5% Singapore Asia SPMP
SPMP67_bin.8 4,132,646 97.32% 2.42% Singapore Asia SPMP
SPMP72_bin.15 3,989,518 95.07% 0.46% Singapore Asia SPMP
SPMP85_bin.28 4,047,074 91.93% 1.55% Singapore Asia SPMP
SPMP88_bin.113 4,299,142 97.15% 1.86% Singapore Asia SPMP
SPMP91_bin.78 4,322,074 93.1% 0.74% Singapore Asia SPMP
SPMP92_bin.30 3,833,013 90.25% 0.5% Singapore Asia SPMP
SPMP94_bin.16 4,124,228 96.22% 0.99% Singapore Asia SPMP
SPMP95_bin.52 3,905,859 94.82% 0.12% Singapore Asia SPMP
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
A111.bin_5_CGC38 CGCFAM_00001 Yes 4 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
A111.bin_5_CGC54 CGCFAM_00001 Yes 4 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
A111.bin_5_CGC66 CGCFAM_00001 Yes 4 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
A111.bin_5_CGC71 CGCFAM_00001 Yes 3 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
A111.bin_5_CGC9 CGCFAM_00001 Yes 5 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
A111.bin_5_CGC6 CGCFAM_00013 Yes 4 1
A111.bin_5_CGC29 CGCFAM_00016 Yes 20 6 host glycan
A111.bin_5_CGC30 CGCFAM_00017 Yes 8 5 fructan
A111.bin_5_CGC23 CGCFAM_00023 Yes 4 2
A111.bin_5_CGC49 CGCFAM_00029 Yes 8 4
A111.bin_5_CGC48 CGCFAM_00043 Yes 8 3 alpha-glucan
PUL0554_A111.bin_5_C0 CGCFAM_00043 Yes 5 2 alpha-glucan
A111.bin_5_CGC40 CGCFAM_00059 Yes 4 1
A111.bin_5_CGC65 CGCFAM_00069 Yes 4 1
A111.bin_5_CGC20 CGCFAM_00101 Yes 11 6 beta-glucan
PUL0065_A111.bin_5_C0 CGCFAM_00101 Yes 11 6 beta-glucan
A111.bin_5_CGC46 CGCFAM_00104 Yes 3 1
A111.bin_5_CGC14 CGCFAM_00109 Yes 13 7 host glycan
A111.bin_5_CGC22 CGCFAM_00111 Yes 7 1 alpha-glucan
A111.bin_5_CGC10 CGCFAM_00138 Yes 5 2
A111.bin_5_CGC19 CGCFAM_00148 Yes 9 7
A111.bin_5_CGC67 CGCFAM_00152 Yes 8 4
A111.bin_5_CGC28 CGCFAM_00170 Yes 7 4
A111.bin_5_CGC11 CGCFAM_00221 Yes 3 1
A111.bin_5_CGC36 CGCFAM_00229 Yes 9 1
Top CAZyme Families