Cluster: A111.bin_5_CGC14
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 7
- Substrate: host glycan
- Genome ID: A111.bin_5
- CGC Family ID: CGCFAM_00109
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A111_contig_1048 | A111_contig_1048_61 | 97150 | 99024 | - | 1.C.39.4.5 |
| TC | A111_contig_1048 | A111_contig_1048_62 | 99320 | 102481 | + | 1.B.14.6.1 |
| TC | A111_contig_1048 | A111_contig_1048_63 | 102501 | 103991 | + | 8.A.46.3.2 |
| CAZyme | A111_contig_1048 | A111_contig_1048_64 | 104323 | 106140 | + | GH2 |
| TF | A111_contig_1048 | A111_contig_1048_65 | 106246 | 110199 | + | HTH_AraC |
| TC | A111_contig_1048 | A111_contig_1048_66 | 110500 | 113550 | + | 1.B.14.6.1 |
| pfam | A111_contig_1048 | A111_contig_1048_67 | 113574 | 115148 | + | SusD_RagB | SusD-like_3 |
| CAZyme | A111_contig_1048 | A111_contig_1048_68 | 115233 | 117875 | + | GH43_31 |
| CAZyme | A111_contig_1048 | A111_contig_1048_69 | 118120 | 119088 | + | GH43_31 |
| CAZyme | A111_contig_1048 | A111_contig_1048_70 | 119092 | 120060 | + | GH43_31 |
| CAZyme | A111_contig_1048 | A111_contig_1048_71 | 120088 | 121095 | + | GH43_3 |
| CAZyme | A111_contig_1048 | A111_contig_1048_72 | 121038 | 123827 | + | CBM67 | GH78 |
| CAZyme | A111_contig_1048 | A111_contig_1048_73 | 123861 | 125891 | + | GH182 |
Gene ID: A111_contig_1048_61
Type: TC
Location: 97150 - 99024 (-)
Type: TC
Location: 97150 - 99024 (-)
Gene ID: A111_contig_1048_62
Type: TC
Location: 99320 - 102481 (+)
Type: TC
Location: 99320 - 102481 (+)
Gene ID: A111_contig_1048_63
Type: TC
Location: 102501 - 103991 (+)
Type: TC
Location: 102501 - 103991 (+)
Gene ID: A111_contig_1048_64
Type: CAZyme
Location: 104323 - 106140 (+)
Type: CAZyme
Location: 104323 - 106140 (+)
Gene ID: A111_contig_1048_65
Type: TF
Location: 106246 - 110199 (+)
Type: TF
Location: 106246 - 110199 (+)
Gene ID: A111_contig_1048_66
Type: TC
Location: 110500 - 113550 (+)
Type: TC
Location: 110500 - 113550 (+)
Gene ID: A111_contig_1048_67
Type: pfam
Location: 113574 - 115148 (+)
Type: pfam
Location: 113574 - 115148 (+)
Gene ID: A111_contig_1048_68
Type: CAZyme
Location: 115233 - 117875 (+)
Type: CAZyme
Location: 115233 - 117875 (+)
Gene ID: A111_contig_1048_69
Type: CAZyme
Location: 118120 - 119088 (+)
Type: CAZyme
Location: 118120 - 119088 (+)
Gene ID: A111_contig_1048_70
Type: CAZyme
Location: 119092 - 120060 (+)
Type: CAZyme
Location: 119092 - 120060 (+)
Gene ID: A111_contig_1048_71
Type: CAZyme
Location: 120088 - 121095 (+)
Type: CAZyme
Location: 120088 - 121095 (+)
Gene ID: A111_contig_1048_72
Type: CAZyme
Location: 121038 - 123827 (+)
Type: CAZyme
Location: 121038 - 123827 (+)
Gene ID: A111_contig_1048_73
Type: CAZyme
Location: 123861 - 125891 (+)
Type: CAZyme
Location: 123861 - 125891 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides uniformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.