Cluster: A111.bin_5_CGC29
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 6
- Substrate: host glycan
- Genome ID: A111.bin_5
- CGC Family ID: CGCFAM_00016
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A111_contig_1048 | A111_contig_1048_842 | 1074994 | 1077225 | + | GH92 |
| TF | A111_contig_1048 | A111_contig_1048_843 | 1077237 | 1077830 | + | GerE |
| STP | A111_contig_1048 | A111_contig_1048_844 | 1077842 | 1078831 | + | FecR |
| CAZyme | A111_contig_1048 | A111_contig_1048_845 | 1078897 | 1081173 | + | GH92 |
| NULL(UNKNOWN) | A111_contig_1048 | A111_contig_1048_846 | 1081143 | 1081265 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | A111_contig_1048 | A111_contig_1048_847 | 1081231 | 1082394 | - | DDE_Tnp_1 | DUF4372 |
| TC | A111_contig_1048 | A111_contig_1048_848 | 1082806 | 1086192 | + | 1.B.14.6.13 |
| TC | A111_contig_1048 | A111_contig_1048_849 | 1086204 | 1087793 | + | 8.A.46.2.2 |
| pfam | A111_contig_1048 | A111_contig_1048_850 | 1087816 | 1088829 | + | GH18_BT1044-like |
| pfam | A111_contig_1048 | A111_contig_1048_851 | 1088839 | 1089993 | + | Pentaxin | BT_3987-like_N | Laminin_G_3 |
| CAZyme | A111_contig_1048 | A111_contig_1048_852 | 1090032 | 1092014 | + | GH18 |
| NULL(UNKNOWN) | A111_contig_1048 | A111_contig_1048_853 | 1091990 | 1092130 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A111_contig_1048 | A111_contig_1048_854 | 1092181 | 1094451 | + | GH92 |
| pfam | A111_contig_1048 | A111_contig_1048_855 | 1094473 | 1095783 | + | MFS_1 | MFS_1 |
| CAZyme | A111_contig_1048 | A111_contig_1048_856 | 1095807 | 1096778 | + | GH130_2 |
| CAZyme | A111_contig_1048 | A111_contig_1048_857 | 1097074 | 1099317 | + | GH92 |
| TC | A111_contig_1048 | A111_contig_1048_858 | 1099396 | 1100922 | - | 2.A.21.9.2 |
| peptidase | A111_contig_1048 | A111_contig_1048_859 | 1101361 | 1102245 | - | G04.UNW |
| peptidase | A111_contig_1048 | A111_contig_1048_860 | 1102323 | 1102835 | - | C40.004 |
| TC | A111_contig_1048 | A111_contig_1048_861 | 1102832 | 1103635 | - | 3.A.1.128.6 |
Gene ID: A111_contig_1048_842
Type: CAZyme
Location: 1074994 - 1077225 (+)
Type: CAZyme
Location: 1074994 - 1077225 (+)
Gene ID: A111_contig_1048_843
Type: TF
Location: 1077237 - 1077830 (+)
Type: TF
Location: 1077237 - 1077830 (+)
Gene ID: A111_contig_1048_844
Type: STP
Location: 1077842 - 1078831 (+)
Type: STP
Location: 1077842 - 1078831 (+)
Gene ID: A111_contig_1048_845
Type: CAZyme
Location: 1078897 - 1081173 (+)
Type: CAZyme
Location: 1078897 - 1081173 (+)
Gene ID: A111_contig_1048_846
Type:
Location: 1081143 - 1081265 (-)
Type:
Location: 1081143 - 1081265 (-)
Gene ID: A111_contig_1048_847
Type: pfam
Location: 1081231 - 1082394 (-)
Type: pfam
Location: 1081231 - 1082394 (-)
Gene ID: A111_contig_1048_848
Type: TC
Location: 1082806 - 1086192 (+)
Type: TC
Location: 1082806 - 1086192 (+)
Gene ID: A111_contig_1048_849
Type: TC
Location: 1086204 - 1087793 (+)
Type: TC
Location: 1086204 - 1087793 (+)
Gene ID: A111_contig_1048_850
Type: pfam
Location: 1087816 - 1088829 (+)
Type: pfam
Location: 1087816 - 1088829 (+)
Gene ID: A111_contig_1048_851
Type: pfam
Location: 1088839 - 1089993 (+)
Type: pfam
Location: 1088839 - 1089993 (+)
Gene ID: A111_contig_1048_852
Type: CAZyme
Location: 1090032 - 1092014 (+)
Type: CAZyme
Location: 1090032 - 1092014 (+)
Gene ID: A111_contig_1048_853
Type:
Location: 1091990 - 1092130 (-)
Type:
Location: 1091990 - 1092130 (-)
Gene ID: A111_contig_1048_854
Type: CAZyme
Location: 1092181 - 1094451 (+)
Type: CAZyme
Location: 1092181 - 1094451 (+)
Gene ID: A111_contig_1048_855
Type: pfam
Location: 1094473 - 1095783 (+)
Type: pfam
Location: 1094473 - 1095783 (+)
Gene ID: A111_contig_1048_856
Type: CAZyme
Location: 1095807 - 1096778 (+)
Type: CAZyme
Location: 1095807 - 1096778 (+)
Gene ID: A111_contig_1048_857
Type: CAZyme
Location: 1097074 - 1099317 (+)
Type: CAZyme
Location: 1097074 - 1099317 (+)
Gene ID: A111_contig_1048_858
Type: TC
Location: 1099396 - 1100922 (-)
Type: TC
Location: 1099396 - 1100922 (-)
Gene ID: A111_contig_1048_859
Type: peptidase
Location: 1101361 - 1102245 (-)
Type: peptidase
Location: 1101361 - 1102245 (-)
Gene ID: A111_contig_1048_860
Type: peptidase
Location: 1102323 - 1102835 (-)
Type: peptidase
Location: 1102323 - 1102835 (-)
Gene ID: A111_contig_1048_861
Type: TC
Location: 1102832 - 1103635 (-)
Type: TC
Location: 1102832 - 1103635 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides uniformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.