Cluster: A111.bin_5_CGC20
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 6
- Substrate: beta-glucan
- Genome ID: A111.bin_5
- CGC Family ID: CGCFAM_00101
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A111_contig_1048 | A111_contig_1048_254 | 370823 | 374017 | + | 1.B.14.6.1 |
| TC | A111_contig_1048 | A111_contig_1048_255 | 374031 | 375710 | + | 8.A.46.1.2 |
| NULL(UNKNOWN) | A111_contig_1048 | A111_contig_1048_256 | 375752 | 377722 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | A111_contig_1048 | A111_contig_1048_257 | 377731 | 380352 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A111_contig_1048 | A111_contig_1048_258 | 380747 | 382315 | - | CBM91 | GH43_12 |
| CAZyme | A111_contig_1048 | A111_contig_1048_259 | 382568 | 384349 | + | GH5_4 |
| TF | A111_contig_1048 | A111_contig_1048_260 | 384506 | 388648 | + | 0035607 |
| CAZyme | A111_contig_1048 | A111_contig_1048_261 | 388787 | 391669 | + | GH31_4 |
| CAZyme | A111_contig_1048 | A111_contig_1048_262 | 391854 | 394352 | + | GH2 |
| CAZyme | A111_contig_1048 | A111_contig_1048_263 | 394400 | 396613 | + | GH3 |
| CAZyme | A111_contig_1048 | A111_contig_1048_264 | 396810 | 399272 | + | GH95 |
Gene ID: A111_contig_1048_254
Type: TC
Location: 370823 - 374017 (+)
Type: TC
Location: 370823 - 374017 (+)
Gene ID: A111_contig_1048_255
Type: TC
Location: 374031 - 375710 (+)
Type: TC
Location: 374031 - 375710 (+)
Gene ID: A111_contig_1048_256
Type:
Location: 375752 - 377722 (+)
Type:
Location: 375752 - 377722 (+)
Gene ID: A111_contig_1048_257
Type:
Location: 377731 - 380352 (+)
Type:
Location: 377731 - 380352 (+)
Gene ID: A111_contig_1048_258
Type: CAZyme
Location: 380747 - 382315 (-)
Type: CAZyme
Location: 380747 - 382315 (-)
Gene ID: A111_contig_1048_259
Type: CAZyme
Location: 382568 - 384349 (+)
Type: CAZyme
Location: 382568 - 384349 (+)
Gene ID: A111_contig_1048_260
Type: TF
Location: 384506 - 388648 (+)
Type: TF
Location: 384506 - 388648 (+)
Gene ID: A111_contig_1048_261
Type: CAZyme
Location: 388787 - 391669 (+)
Type: CAZyme
Location: 388787 - 391669 (+)
Gene ID: A111_contig_1048_262
Type: CAZyme
Location: 391854 - 394352 (+)
Type: CAZyme
Location: 391854 - 394352 (+)
Gene ID: A111_contig_1048_263
Type: CAZyme
Location: 394400 - 396613 (+)
Type: CAZyme
Location: 394400 - 396613 (+)
Gene ID: A111_contig_1048_264
Type: CAZyme
Location: 396810 - 399272 (+)
Type: CAZyme
Location: 396810 - 399272 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides uniformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.