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Cluster: A111.bin_5_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A111_contig_1048 A111_contig_1048_2101 2473768 2475219 + 2.A.36.6.11
TC A111_contig_1048 A111_contig_1048_2102 2475335 2477002 + 4.C.1.1.4
CAZyme A111_contig_1048 A111_contig_1048_2103 2477346 2479499 - GH97
CAZyme A111_contig_1048 A111_contig_1048_2104 2479521 2482019 - GH31
CAZyme A111_contig_1048 A111_contig_1048_2105 2482054 2483859 - GH66
pfam A111_contig_1048 A111_contig_1048_2106 2483873 2485369 - SusE | SusF_SusE | SusF_SusE
TC A111_contig_1048 A111_contig_1048_2107 2485389 2486894 - 8.A.46.1.5
TC A111_contig_1048 A111_contig_1048_2108 2486894 2489896 - 1.B.14.6.1
Gene ID: A111_contig_1048_2101
Type: TC
Location: 2473768 - 2475219 (+)
Gene ID: A111_contig_1048_2102
Type: TC
Location: 2475335 - 2477002 (+)
Gene ID: A111_contig_1048_2103
Type: CAZyme
Location: 2477346 - 2479499 (-)
Gene ID: A111_contig_1048_2104
Type: CAZyme
Location: 2479521 - 2482019 (-)
Gene ID: A111_contig_1048_2105
Type: CAZyme
Location: 2482054 - 2483859 (-)
Gene ID: A111_contig_1048_2106
Type: pfam
Location: 2483873 - 2485369 (-)
Gene ID: A111_contig_1048_2107
Type: TC
Location: 2485389 - 2486894 (-)
Gene ID: A111_contig_1048_2108
Type: TC
Location: 2486894 - 2489896 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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