Family: CGCFAM_00001
Members:
703
(Labeled: 23, Unlabeled: 680)
In Labeled Fam:
YES
Substrates:
Beta-glucan (10)
Pectin (4)
Host glycan (3)
Xylan (3)
Beta-mannan (2)
Galactan (1)
| Gene Cluster ID ▼ | Gene Count | CAZyme Count | Substrate | Domain | Phylum | Class | Order | Family | Genus | Species |
|---|---|---|---|---|---|---|---|---|---|---|
| PUL0440 | 5 | 2 | beta-mannan | Bacteria | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Chitinophaga | Chitinophaga pinensis |
| PUL0420_Rep_500_C7 | 3 | 1 | pectin | Bacteria | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroides | Bacteroides congonensis |
| PUL0420 | 4 | 2 | pectin | Bacteria | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroides | Bacteroides ovatus |
| PUL0357 | 3 | 1 | host glycan | Bacteria | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroides | Bacteroides thetaiotaomicron |
| PUL0325_MGYG000003252_C7 | 5 | 2 | beta-glucan | Bacteria | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroides | Bacteroides sp900761785 |
| PUL0315 | 4 | 1 | galactan | Bacteria | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Zobellia | Zobellia galactanivorans |
| PUL0221 | 10 | 4 | beta-glucan | Bacteria | uncultured bacterium Contig1529 | |||||
| PUL0118 | 7 | 3 | beta-glucan | Bacteria | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroides | Bacteroides uniformis |
| VatanenT_2016_SRR4305041_bin.1_CGC72 | 5 | 1 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan | Bacteria | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroides | Bacteroides sp900547205 |
| VatanenT_2016_SRR4305041_bin.1_CGC40 | 7 | 3 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan | Bacteria | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroides | Bacteroides sp900547205 |
| SW196_bin.29_CGC46 | 6 | 3 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan | Bacteria | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Phocaeicola | Phocaeicola faecicola |
| SW196_bin.29_CGC10 | 5 | 1 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan | Bacteria | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Phocaeicola | Phocaeicola faecicola |
| SW054_bin.33_CGC22 | 8 | 2 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan | Bacteria | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Phocaeicola | Phocaeicola coprophilus |
| SW054_bin.33_CGC10 | 5 | 1 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan | Bacteria | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Phocaeicola | Phocaeicola coprophilus |
| SW048_14_sub_CGC6 | 5 | 2 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan | Bacteria | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroides | Bacteroides muris |
Showing 16 to 30 of 703 entries
Gene Count Distribution
CAZyme Count Distribution
Gene Clusters by Phylum
Gene Count vs. CAZyme Count
Family Taxonomic Lineage
Family Distribution
Family Network
How to explore the network:
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Network legend:
node: CGC
edge: the CGCs share similarity (Jaccard index ≥ 0.5)
edge label: CGC similarity score (Jaccard index score)
node: CGC
edge: the CGCs share similarity (Jaccard index ≥ 0.5)
edge label: CGC similarity score (Jaccard index score)