Cluster: HRGMv2_0301_CGC27
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_0301
- CGC Family ID: CGCFAM_00007
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0301_9 | HRGMv2_0301_9_58 | 67916 | 68551 | - | 9.B.18.1.2 |
| pfam | HRGMv2_0301_9 | HRGMv2_0301_9_59 | 68739 | 69119 | - | PDDEXK_3 |
| NULL(UNKNOWN) | HRGMv2_0301_9 | HRGMv2_0301_9_60 | 69244 | 69879 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0301_9 | HRGMv2_0301_9_61 | 69869 | 70981 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_0301_9 | HRGMv2_0301_9_62 | 70985 | 71956 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0301_9 | HRGMv2_0301_9_63 | 72061 | 73164 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_0301_9 | HRGMv2_0301_9_64 | 73351 | 74409 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0301_9 | HRGMv2_0301_9_65 | 74413 | 75294 | - | GT2 |
| pfam | HRGMv2_0301_9 | HRGMv2_0301_9_66 | 75319 | 76488 | - | EpsG |
| NULL(UNKNOWN) | HRGMv2_0301_9 | HRGMv2_0301_9_67 | 76551 | 77753 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0301_9 | HRGMv2_0301_9_68 | 77785 | 78774 | - | GT2 |
| pfam | HRGMv2_0301_9 | HRGMv2_0301_9_69 | 78761 | 80032 | - | UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| pfam | HRGMv2_0301_9 | HRGMv2_0301_9_70 | 80140 | 81108 | - | ATPgrasp_TupA |
| CAZyme | HRGMv2_0301_9 | HRGMv2_0301_9_71 | 81110 | 82261 | - | GT56 |
| TC | HRGMv2_0301_9 | HRGMv2_0301_9_72 | 82304 | 83809 | - | 2.A.66.2.7 |
Gene ID: HRGMv2_0301_9_58
Type: TC
Location: 67916 - 68551 (-)
Type: TC
Location: 67916 - 68551 (-)
Gene ID: HRGMv2_0301_9_59
Type: pfam
Location: 68739 - 69119 (-)
Type: pfam
Location: 68739 - 69119 (-)
Gene ID: HRGMv2_0301_9_60
Type:
Location: 69244 - 69879 (-)
Type:
Location: 69244 - 69879 (-)
Gene ID: HRGMv2_0301_9_61
Type: CAZyme
Location: 69869 - 70981 (-)
Type: CAZyme
Location: 69869 - 70981 (-)
Gene ID: HRGMv2_0301_9_62
Type:
Location: 70985 - 71956 (-)
Type:
Location: 70985 - 71956 (-)
Gene ID: HRGMv2_0301_9_63
Type: CAZyme
Location: 72061 - 73164 (-)
Type: CAZyme
Location: 72061 - 73164 (-)
Gene ID: HRGMv2_0301_9_64
Type:
Location: 73351 - 74409 (-)
Type:
Location: 73351 - 74409 (-)
Gene ID: HRGMv2_0301_9_65
Type: CAZyme
Location: 74413 - 75294 (-)
Type: CAZyme
Location: 74413 - 75294 (-)
Gene ID: HRGMv2_0301_9_66
Type: pfam
Location: 75319 - 76488 (-)
Type: pfam
Location: 75319 - 76488 (-)
Gene ID: HRGMv2_0301_9_67
Type:
Location: 76551 - 77753 (-)
Type:
Location: 76551 - 77753 (-)
Gene ID: HRGMv2_0301_9_68
Type: CAZyme
Location: 77785 - 78774 (-)
Type: CAZyme
Location: 77785 - 78774 (-)
Gene ID: HRGMv2_0301_9_69
Type: pfam
Location: 78761 - 80032 (-)
Type: pfam
Location: 78761 - 80032 (-)
Gene ID: HRGMv2_0301_9_70
Type: pfam
Location: 80140 - 81108 (-)
Type: pfam
Location: 80140 - 81108 (-)
Gene ID: HRGMv2_0301_9_71
Type: CAZyme
Location: 81110 - 82261 (-)
Type: CAZyme
Location: 81110 - 82261 (-)
Gene ID: HRGMv2_0301_9_72
Type: TC
Location: 82304 - 83809 (-)
Type: TC
Location: 82304 - 83809 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella melaninogenica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.