PROTEIN: HRGMv2_0301_9_64
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Protein File & Metadata
Source:
HRGMv2_0301_9_64.pdb
Genome ID:
Protein ID:
HRGMv2_0301_9_64
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Protein Sequence
MKQIIIDPRL KYNYASWYLL GIKRLLKGWK IVYDVSPFKG IKYENTADYN SGFAFIISNK 60 DKEKKVFVDT EDVAKIFEDR YEWCDVYGMV NPTIEQVTEY DKLIAIGPEF GVTLGSRFST 120 IIRCLKLFLK GRKYSSISFK GYLRDYLYTN IRRRPIEAYE CETKVHHNYI FHASTLWYNK 180 FAATDTNMYR GEFLKACKKA GINIEGGLFY VNSDSVLQEM PDYPKYKEEY KDFIYESRLS 240 MDDYIKKTKE SVVVFNTPSV CECHGWKLAE YLCMGKAIIS TPLTREMPAT LEHGKHVHFV 300 NSIDEIYDAV VKINSDEHYR KKLQEGARQY YEKWIAPEIV IQRLLEKVGE QL 352
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5F734-F1-model_v4 | 1 | 348 | 2 | 354 | 0.6143 |
0.6488 |
| AF-F4IBV4-F1-model_v4 | 1 | 352 | 8 | 398 | 0.6135 |
0.6741 |
| AF-C6TI07-F1-model_v4 | 1 | 352 | 8 | 403 | 0.6116 |
0.675 |
| AF-Q5FAD9-F1-model_v4 | 3 | 350 | 1 | 354 | 0.605 |
0.6394 |
| AF-A0A1D6E1K2-F1-model_v4 | 1 | 352 | 18 | 413 | 0.6038 |
0.6732 |
| AF-Q7XLZ9-F1-model_v4 | 1 | 352 | 19 | 414 | 0.6003 |
0.6701 |
| AF-A0A0N4UFD9-F1-model_v4 | 2 | 352 | 1 | 401 | 0.5999 |
0.662 |
| AF-A0A2K6WNG9-F1-model_v4 | 2 | 352 | 1 | 401 | 0.5994 |
0.664 |
| AF-Q9I1N1-F1-model_v4 | 2 | 352 | 1 | 395 | 0.5969 |
0.6577 |
| AF-Q9I3V9-F1-model_v4 | 1 | 350 | 1 | 374 | 0.5948 |
0.6405 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6N1CP16-F1-model_v4 | GT4 | 1 | 352 | 2 | 361 | 0.6307 |
0.6626 |
| AF-F4BT06-F1-model_v4 | GT4 | 2 | 352 | 1 | 366 | 0.6291 |
0.6657 |
| AF-A0A7T4WKV0-F1-model_v4 | GT4 | 1 | 352 | 1 | 361 | 0.6273 |
0.6586 |
| AF-E6X1A2-F1-model_v4 | GT4 | 1 | 352 | 1 | 338 | 0.625 |
0.6652 |
| AF-A0A481RIR3-F1-model_v4 | GT4 | 1 | 352 | 5 | 394 | 0.6246 |
0.6793 |
| AF-A0A7M2SIW1-F1-model_v4 | GT4 | 2 | 351 | 1 | 370 | 0.6237 |
0.665 |
| AF-D1JHQ0-F1-model_v4 | GT4 | 1 | 351 | 1 | 357 | 0.6217 |
0.6582 |
| AF-A0A1D9MF20-F1-model_v4 | GT4 | 1 | 351 | 2 | 338 | 0.6195 |
0.6631 |
| AF-F0LL02-F1-model_v4 | GT4 | 1 | 352 | 1 | 380 | 0.6178 |
0.6635 |
| AF-A0A7G9Z2K1-F1-model_v4 | GT4 | 6 | 352 | 1 | 373 | 0.6171 |
0.667 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6N1CP16 | GT4 | 1 | 352 | 2 | 361 | 0.6307 |
0.6626 |
| QZY02528.1 | GT4 | 2 | 352 | 1 | 361 | 0.6261 |
0.6597 |
| E6X1A2 | GT4 | 1 | 352 | 1 | 338 | 0.625 |
0.6652 |
| A0A6B9Z3W8 | GT4 | 1 | 352 | 1 | 354 | 0.6249 |
0.6527 |
| A0A481RIR3 | GT4 | 1 | 352 | 5 | 394 | 0.6246 |
0.6793 |
| E8N087 | GT4 | 1 | 351 | 1 | 342 | 0.6211 |
0.6587 |
| H5SIC0 | GT4 | 2 | 351 | 1 | 380 | 0.6198 |
0.6684 |
| UUI74547.1 | GT4 | 3 | 350 | 1 | 345 | 0.6195 |
0.6495 |
| F0LL02 | GT4 | 1 | 352 | 1 | 380 | 0.6178 |
0.6635 |
| A0A7G9Z2K1 | GT4 | 6 | 352 | 1 | 373 | 0.6171 |
0.667 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7qsg-assembly2.cif.gz_B | 1 | 351 | 1 | 303 | 0.649 |
0.7227 |
| 6tvp-assembly1.cif.gz_B | 1 | 351 | 2 | 388 | 0.6225 |
0.6751 |
| 6tvp-assembly1.cif.gz_A | 1 | 351 | 2 | 385 | 0.6067 |
0.6581 |
| 3mbo-assembly3.cif.gz_E | 2 | 351 | 1 | 371 | 0.6011 |
0.6464 |
| 7qsg-assembly1.cif.gz_A | 1 | 351 | 2 | 376 | 0.6007 |
0.6471 |
| 7mi0-assembly1.cif.gz_A | 1 | 352 | 1 | 377 | 0.589 |
0.6353 |
| 5ub5-assembly1.cif.gz_A | 21 | 350 | 23 | 335 | 0.5498 |
0.6339 |
| 8p1x-assembly1.cif.gz_AAA | 3 | 350 | 1 | 492 | 0.5269 |
0.6335 |
| 7vfk-assembly1.cif.gz_A | 2 | 352 | 1 | 495 | 0.5216 |
0.6262 |
| 7ec1-assembly1.cif.gz_B | 2 | 352 | 1 | 495 | 0.5211 |
0.626 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q4JAK2-F1-model_v4 | 1 | 352 | 1 | 352 | 0.6219 |
0.6492 |
| AF-Q9R9N2-F1-model_v4 | 1 | 352 | 5 | 351 | 0.6125 |
0.647 |
| AF-O68547-F1-model_v4 | 1 | 352 | 5 | 349 | 0.5997 |
0.6378 |
| AF-P54490-F1-model_v4 | 3 | 351 | 1 | 352 | 0.5968 |
0.633 |
| AF-Q6DIQ1-F1-model_v4 | 4 | 350 | 1 | 338 | 0.588 |
0.6308 |
| AF-D4GU66-F1-model_v4 | 8 | 352 | 1 | 372 | 0.5864 |
0.6364 |
| AF-C7MSY6-F1-model_v4 | 1 | 350 | 10 | 417 | 0.5607 |
0.6396 |
| AF-O31681-F1-model_v4 | 3 | 352 | 1 | 328 | 0.5575 |
0.6512 |
| AF-D5USX8-F1-model_v4 | 1 | 350 | 10 | 415 | 0.5542 |
0.636 |
| AF-Q96WW6-F1-model_v4 | 1 | 352 | 15 | 428 | 0.5541 |
0.6656 |