dbCAN Logo

PROTEIN: HRGMv2_0301_9_60

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_0301_9_60.pdb
Genome ID:
HRGMv2_0301
Protein ID:
HRGMv2_0301_9_60

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MLYKIAHILR   DKLPWIWDVI   GIINSFLFEL   RYDGKMGYVQ   KILTHFTKTT   EEDGNALFYK 60
IEVLCKDNLS   LLAKMFAEQP   ASAFDFFKPH   GFDELSLNKL   VKDKSFLAYI   VVVEGNAQQK 120
VCVGYFFQRS   FFWGKSFRGY   MTDYRWQRRG   INKMMNLCAT   DISSLLGLRV   FGTIAPDNIA 180
SMKSAQAAND   IHIVETLPNG   DYYVEYKPKT   K 211
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q9I2H6-F1-model_v4 36 210 6 188 0.6991 0.8125
AF-Q9HT95-F1-model_v4 40 208 17 186 0.698 0.8346
AF-Q8DNF9-F1-model_v4 55 210 1 172 0.6896 0.8532
AF-Q2G0E2-F1-model_v4 52 210 1 168 0.6839 0.8217
AF-K0FC81-F1-model_v4 36 211 3 186 0.6817 0.8053
AF-A0A132Z628-F1-model_v4 50 210 1 174 0.6817 0.8249
AF-A0A0H3GX22-F1-model_v4 36 211 1 175 0.6746 0.765
AF-A0A044UZA8-F1-model_v4 25 211 1 180 0.6704 0.7724
AF-A0A5S6PU33-F1-model_v4 25 211 1 177 0.6666 0.784
AF-Q9CD65-F1-model_v4 29 211 4 198 0.6651 0.7905
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A1B1NKB7-F1-model_v4 GT0 26 210 129 306 0.5198 0.7316
AF-A0A126UXC5-F1-model_v4 GT0 49 211 120 292 0.5188 0.7825
AF-A0A348FVN1-F1-model_v4 GT0 23 211 325 504 0.4987 0.8274
AF-A0A6S5Y1K8-F1-model_v4 GT0 15 211 121 484 0.489 0.7322
AF-Q58462-F1-model_v4 GT0 5 208 161 484 0.4823 0.7026
AF-Q6LNP0-F1-model_v4 GT0 24 210 179 515 0.4681 0.7509
AF-A0A090IGC3-F1-model_v4 GT0 24 210 178 530 0.4665 0.7522
UTW51656.1 GT0 26 210 162 496 0.4651 0.7431
AF-I6YV40-F1-model_v4 GT0 35 208 67 487 0.4618 0.776
AF-E6W2M6-F1-model_v4 GT0 25 211 171 510 0.4613 0.7371
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A4P8KRG1 GH16_24 1 211 1 400 0.5115 0.7076
G8TF00 GT2 45 211 1 163 0.455 0.788
UTF94154.1 GT2 50 211 1 160 0.4496 0.8036
UCA58850.1 GT2 50 211 1 159 0.4483 0.8062
A0A9Q9RPB2 GH16_18 52 210 281 578 0.411 0.7817
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4u5y-assembly1.cif.gz_A 36 208 1 165 0.742 0.8542
4nxy-assembly1.cif.gz_A 33 208 1 176 0.7163 0.8037
6c37-assembly1.cif.gz_A 30 211 1 193 0.6666 0.7877
3eo4-assembly2.cif.gz_C 49 208 1 154 0.6634 0.793
5ix3-assembly1.cif.gz_A 48 211 1 166 0.6596 0.768
2fck-assembly1.cif.gz_A-2 33 208 1 174 0.6492 0.7391
4u9v-assembly1.cif.gz_B 24 210 2 196 0.6482 0.7336
4u9w-assembly3.cif.gz_C 26 210 8 194 0.6416 0.7327
7kpu-assembly2.cif.gz_A 26 210 8 196 0.6377 0.7306
4u9w-assembly1.cif.gz_A 26 210 11 196 0.6376 0.7309
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q9I2H6-F1-model_v4 36 210 6 188 0.6991 0.8125
AF-Q9HT95-F1-model_v4 40 208 17 186 0.698 0.8346
AF-O31633-F1-model_v4 40 210 1 178 0.6873 0.8019
AF-P0A949-F1-model_v4 39 210 10 189 0.6655 0.7984
AF-O94498-F1-model_v4 36 211 2 184 0.6627 0.7674
AF-O31648-F1-model_v4 36 210 1 168 0.6308 0.7277
AF-Q6NUH2-F1-model_v4 26 209 26 219 0.5953 0.738
AF-Q47317-F1-model_v4 18 211 113 312 0.5325 0.7041
AF-O05581-F1-model_v4 26 211 126 309 0.5253 0.7402
AF-Q58462-F1-model_v4 5 208 161 484 0.4821 0.7018
Download Full SwissProt Results