PROTEIN: HRGMv2_0301_9_67
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Protein File & Metadata
Source:
HRGMv2_0301_9_67.pdb
Genome ID:
Protein ID:
HRGMv2_0301_9_67
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Protein Sequence
MKVVMISVMM PAAENIRGTS ALPYHLLAGR EKSIEVILYS YNLNRLSKEQ INSVAKDLNI 60 RIYILPVPWW YNFFLRFLLP FRILLNYPIG NYISLSSLQL DTIINNNPDA IWIYGEELSR 120 VSCQLKDFKR VHTLPDCESL YYYRMLGRRF AIRNKKRFWR SVFMYPKYLN MEKQFDISAN 180 IHYHLVGEED VNFLKEICPK IQAHFLRHPH YQVAKPAKVI SFSTPKIKVL IAGQYNLYMQ 240 QDADTMINCL IKNKELSDLK EHYVYTFLGK GWEHHVNSLN NSGYEAHHIK FAPDYIEEVC 300 KHDIQITPIC IGTGTKGKVL DAIANGLLVI GSWYALENIA VEHNISCLQY NQIEDIVEIL 360 EKVYLKSSVY EAMAERGRKA ILSQHNNSIV ADKLFSLFQN 400
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9I1N1-F1-model_v4 | 1 | 400 | 1 | 393 | 0.8144 |
0.8515 |
| AF-Q8CWU0-F1-model_v4 | 1 | 400 | 3 | 382 | 0.7901 |
0.8332 |
| AF-Q58469-F1-model_v4 | 1 | 400 | 4 | 389 | 0.787 |
0.8247 |
| AF-X8F781-F1-model_v4 | 1 | 400 | 1 | 382 | 0.7846 |
0.8224 |
| AF-P9WMZ3-F1-model_v4 | 1 | 400 | 2 | 380 | 0.7844 |
0.8283 |
| AF-F4IBV4-F1-model_v4 | 1 | 400 | 9 | 395 | 0.7788 |
0.826 |
| AF-Q5F602-F1-model_v4 | 2 | 400 | 1 | 376 | 0.7779 |
0.823 |
| AF-C6TI07-F1-model_v4 | 1 | 400 | 9 | 400 | 0.7715 |
0.812 |
| AF-A0A0H3GSH7-F1-model_v4 | 1 | 400 | 3 | 381 | 0.7704 |
0.8137 |
| AF-A4SH27-F1-model_v4 | 2 | 400 | 1 | 375 | 0.7697 |
0.818 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1P8JL40-F1-model_v4 | GT0 | 1 | 399 | 1 | 397 | 0.9521 |
0.9641 |
| AF-A0A2D3MA78-F1-model_v4 | GT0 | 1 | 399 | 1 | 395 | 0.9514 |
0.9666 |
| A0A8D5JMV3 | GT4 | 1 | 400 | 1 | 392 | 0.8557 |
0.8915 |
| AF-A0A7G7GEB5-F1-model_v4 | GT4 | 1 | 400 | 1 | 393 | 0.8515 |
0.8833 |
| BDU38865.1 | GT4 | 1 | 400 | 1 | 383 | 0.8501 |
0.8904 |
| AF-A0A7L7L966-F1-model_v4 | GT4 | 1 | 400 | 1 | 393 | 0.8501 |
0.8819 |
| AF-A0A1Z4QNR9-F1-model_v4 | GT4 | 1 | 400 | 1 | 401 | 0.8489 |
0.87 |
| A0A0D8DBH4 | GT4 | 1 | 400 | 2 | 395 | 0.8483 |
0.8812 |
| AF-A0A7L8CZ03-F1-model_v4 | GT4 | 1 | 400 | 2 | 395 | 0.8448 |
0.8838 |
| V4JMC2 | GT4 | 1 | 400 | 8 | 403 | 0.8445 |
0.8783 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| F0SX32 | GT4 | 1 | 400 | 1 | 390 | 0.8569 |
0.8888 |
| A0A8D5JMV3 | GT4 | 1 | 400 | 1 | 392 | 0.8557 |
0.8915 |
| A0A1Y0FY02 | GT4 | 1 | 400 | 1 | 411 | 0.8549 |
0.8915 |
| BDU38865.1 | GT4 | 1 | 400 | 1 | 383 | 0.8501 |
0.8904 |
| A0A0D8DBH4 | GT4 | 1 | 400 | 2 | 395 | 0.8483 |
0.8812 |
| A0A9E8NML5 | GT4 | 1 | 400 | 6 | 406 | 0.8475 |
0.8724 |
| A0A193LEL0 | GT4 | 1 | 400 | 1 | 401 | 0.8471 |
0.8801 |
| A0A5C1MFN0 | GT4 | 1 | 400 | 1 | 393 | 0.847 |
0.8754 |
| A9B7Z8 | GT4 | 1 | 400 | 1 | 398 | 0.8447 |
0.8696 |
| V4JMC2 | GT4 | 1 | 400 | 8 | 403 | 0.8445 |
0.8783 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7qsg-assembly1.cif.gz_A | 1 | 400 | 4 | 374 | 0.765 |
0.8206 |
| 3mbo-assembly1.cif.gz_B | 1 | 400 | 1 | 364 | 0.7519 |
0.8115 |
| 3mbo-assembly4.cif.gz_G | 1 | 400 | 1 | 360 | 0.7491 |
0.8121 |
| 3mbo-assembly3.cif.gz_F | 1 | 400 | 1 | 364 | 0.7469 |
0.8065 |
| 5n7z-assembly1.cif.gz_A | 1 | 400 | 1 | 357 | 0.7464 |
0.8073 |
| 2jjm-assembly1.cif.gz_B | 1 | 400 | 1 | 357 | 0.7421 |
0.8064 |
| 3c4q-assembly2.cif.gz_B | 1 | 400 | 1 | 388 | 0.7414 |
0.7804 |
| 7mi0-assembly1.cif.gz_A | 1 | 400 | 3 | 374 | 0.7403 |
0.7914 |
| 6kih-assembly2.cif.gz_B | 1 | 400 | 1 | 395 | 0.7398 |
0.7712 |
| 3c4q-assembly1.cif.gz_A | 1 | 400 | 1 | 388 | 0.7395 |
0.7788 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58469-F1-model_v4 | 1 | 400 | 4 | 389 | 0.787 |
0.8247 |
| AF-P9WMZ3-F1-model_v4 | 1 | 400 | 2 | 380 | 0.7844 |
0.8283 |
| AF-P9WMZ2-F1-model_v4 | 1 | 400 | 2 | 380 | 0.7842 |
0.8281 |
| AF-Q93P60-F1-model_v4 | 1 | 400 | 1 | 386 | 0.7687 |
0.8107 |
| AF-P46915-F1-model_v4 | 1 | 400 | 1 | 375 | 0.7638 |
0.8076 |
| AF-Q7KWM5-F1-model_v4 | 1 | 400 | 8 | 419 | 0.7637 |
0.7997 |
| AF-Q9DBE8-F1-model_v4 | 1 | 400 | 15 | 413 | 0.763 |
0.7971 |
| AF-O05083-F1-model_v4 | 1 | 398 | 1 | 353 | 0.7628 |
0.8305 |
| AF-Q9H553-F1-model_v4 | 1 | 400 | 15 | 413 | 0.7617 |
0.7966 |
| AF-Q48455-F1-model_v4 | 1 | 399 | 2 | 388 | 0.7611 |
0.7995 |