y
Basic Information | |
---|---|
Species | Fragaria vesca |
Cazyme ID | mrna08940.1-v1.0-hybrid |
Family | GT8 |
Protein Properties | Length: 507 Molecular Weight: 57559.5 Isoelectric Point: 8.376 |
Chromosome | Chromosome/Scaffold: 5 Start: 9124427 End: 9128171 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT8 | 31 | 318 | 1.4e-25 |
QQQKQHRNAYAAMMYMGTPRDYEFYVATRVMIRSLVKLNVDADLVVIASPDVPLRWVQAIQLRCKLRSTGVLKTATGLVEATSFPVELDAAEIFCVRFVG FLIRIEDGEQEDGAKVVRVENLNNPYKDQHNFDKRFKLTLNKLYAWSLVQYDRVVMLDSDNLFLQNTDELFQCGQFCAAFINPCIFHTGLFVLQPSMEVF KDMLHQLDIGKDNPDGADQGFIGGYFPDLLSQPLFHPPSDGSKLNGTYRLSLGYQMDASYYYLRLHWSVPCGPNSVITYPGAAWLKPW |
Full Sequence |
---|
Protein Sequence Length: 507 Download |
MVRGSIGILA VLFLWVWETT AYGELSRQPQ QQQKQHRNAY AAMMYMGTPR DYEFYVATRV 60 MIRSLVKLNV DADLVVIASP DVPLRWVQAI QLRCKLRSTG VLKTATGLVE ATSFPVELDA 120 AEIFCVRFVG FLIRIEDGEQ EDGAKVVRVE NLNNPYKDQH NFDKRFKLTL NKLYAWSLVQ 180 YDRVVMLDSD NLFLQNTDEL FQCGQFCAAF INPCIFHTGL FVLQPSMEVF KDMLHQLDIG 240 KDNPDGADQG FIGGYFPDLL SQPLFHPPSD GSKLNGTYRL SLGYQMDASY YYLRLHWSVP 300 CGPNSVITYP GAAWLKPWYW WSWPVLPLGI SWHKQRHNTL GYGAEMPVFV IQFIIFLGII 360 TVTRLARPNM SKLCYRRSDK GIIHTALKVI AMLSILAAYT VPFLVIPHTI HPILGWSLYF 420 LASFTLCFIA VNAFSLPMLP VLVPWIGIFG VLLVMVCPWF PNGVIRALSV FLYAFCAAPF 480 LWVSLVKIMT SLQASLEREA YFPKIG* 540 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd06914 | GT8_GNT1 | 4.0e-5 | 170 | 233 | 67 | + GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases. | ||
COG5597 | COG5597 | 1.0e-6 | 140 | 258 | 133 | + Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | ||
cd00505 | Glyco_transf_8 | 1.0e-7 | 159 | 256 | 125 | + Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+. | ||
pfam01501 | Glyco_transf_8 | 4.0e-9 | 156 | 322 | 196 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. | ||
cd02537 | GT8_Glycogenin | 1.0e-54 | 38 | 324 | 290 | + Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u2x_B | 0.0000000000003 | 145 | 256 | 58 | 172 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 3u2x_A | 0.0000000000003 | 145 | 256 | 58 | 172 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 3u2v_B | 0.0000000000003 | 145 | 256 | 58 | 172 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 3u2v_A | 0.0000000000003 | 145 | 256 | 58 | 172 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 3u2u_B | 0.0000000000003 | 145 | 256 | 58 | 172 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |