y
Basic Information | |
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Species | Mimulus guttatus |
Cazyme ID | mgv1a010839m |
Family | GT8 |
Protein Properties | Length: 301 Molecular Weight: 34627.9 Isoelectric Point: 4.4076 |
Chromosome | Chromosome/Scaffold: 81 Start: 898102 End: 901770 |
Description | galactinol synthase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 26 | 261 | 0 |
SSLTIAGDGDYVKGVVCLAKGLRKVKSAYPLVVAVLPDVPQDHRNLLVNQGCLIREIEPLSPPVCDKESPFIRPYFAINYCKLRLWEFVEYEKMIYMDAD IQVFENIDNLFDLPSGWLYAVMDCLCEMRGPPCAQKVKWPEALGDEPPFYFNGGMFVLEPSLHTYNNLLTSLEVTPPTPFAEQDFLNYFFKDISKPMPPI YNLLVAMLWRHPECVEIDEVKVVHFCVNGSKPWKYN |
Full Sequence |
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Protein Sequence Length: 301 Download |
MAYLYMEQML RINHLIFGNC QDEGGSSLTI AGDGDYVKGV VCLAKGLRKV KSAYPLVVAV 60 LPDVPQDHRN LLVNQGCLIR EIEPLSPPVC DKESPFIRPY FAINYCKLRL WEFVEYEKMI 120 YMDADIQVFE NIDNLFDLPS GWLYAVMDCL CEMRGPPCAQ KVKWPEALGD EPPFYFNGGM 180 FVLEPSLHTY NNLLTSLEVT PPTPFAEQDF LNYFFKDISK PMPPIYNLLV AMLWRHPECV 240 EIDEVKVVHF CVNGSKPWKY NGEEQYMDRA DVKMLIQRWW DIYNDQALDF TGDEITQISG 300 * 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1442 | RfaJ | 1.0e-11 | 105 | 283 | 193 | + Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane] | ||
cd00505 | Glyco_transf_8 | 6.0e-18 | 29 | 260 | 255 | + Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+. | ||
pfam01501 | Glyco_transf_8 | 1.0e-49 | 28 | 262 | 254 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. | ||
cd02537 | GT8_Glycogenin | 5.0e-83 | 35 | 285 | 254 | + Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases. | ||
PLN00176 | PLN00176 | 2.0e-163 | 30 | 292 | 274 | + galactinol synthase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_176053.1 | 0 | 30 | 290 | 28 | 298 | AtGolS2 (Arabidopsis thaliana galactinol synthase 2); transferase, transferring glycosyl groups / transferase, transferring hexosyl groups |
RefSeq | XP_002512546.1 | 0 | 30 | 290 | 32 | 301 | conserved hypothetical protein [Ricinus communis] |
RefSeq | XP_002512547.1 | 0 | 30 | 290 | 32 | 301 | conserved hypothetical protein [Ricinus communis] |
RefSeq | XP_002515233.1 | 0 | 30 | 290 | 30 | 299 | conserved hypothetical protein [Ricinus communis] |
RefSeq | XP_002519283.1 | 0 | 30 | 290 | 16 | 285 | conserved hypothetical protein [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u2t_A | 1e-22 | 10 | 288 | 13 | 280 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) Complexed With Manganese |
PDB | 3u2x_B | 3e-22 | 28 | 288 | 8 | 259 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) Complexed With Manganese |
PDB | 3u2x_A | 3e-22 | 28 | 288 | 8 | 259 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) Complexed With Manganese |
PDB | 3u2v_B | 3e-22 | 28 | 288 | 8 | 259 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) Complexed With Manganese |
PDB | 3u2v_A | 3e-22 | 28 | 288 | 8 | 259 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) Complexed With Manganese |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GR107352 | 243 | 1 | 243 | 0 |
GR137248 | 230 | 36 | 265 | 0 |
GR107353 | 207 | 95 | 301 | 0 |
GR134955 | 216 | 86 | 301 | 0 |
GR137248 | 21 | 263 | 283 | 0.073 |
Sequence Alignments (This image is cropped. Click for full image.) |
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