y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000469141 |
Family | GT8 |
Protein Properties | Length: 1104 Molecular Weight: 124375 Isoelectric Point: 7.9876 |
Chromosome | Chromosome/Scaffold: 02538322 Start: 68 End: 9225 |
Description | plant glycogenin-like starch initiation protein 4 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 289 | 491 | 1.69978e-42 |
AYVTILHSSEAYVCGAITLARSIRQTNSTKDLVLLADDFITPKSIQGLTTAGWKIKRIQRIRSAFAKKGSYNEWNYSKLRVWQLTEYDKVIFIDADLLVL KNIDSFFVHQQLSAVGNNRVLFNSGLMVVEPSNCMFEYLMQKTSKLESYNGGDQGFLNEIFTWWHRLPWRLNALKCFDGSKGANHEMAEDLYAIHYLGFK PWA |
Full Sequence |
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Protein Sequence Length: 1104 Download |
MASKFSSSSS SSSSYSKQRV VLFVLYLIIL SLFFLCLIIS FNFCPTRSNN CATIRNQQVI 60 KNETKNERKN ADWFVAISKL FKIKGRKIKV GLVNVDEHIH SQLHGLSDVE AVSVAFERVA 120 RDRKWKDYFP EWIDEDEKWG KPKCPEIPIP KLEHYEGIDV VLAKVPCGPN GTSDREGIRD 180 VFRLQVNLMV ANLVVGKGWM KPDAHRTVYV VFIGDCGPMV EIFRCDDLLM HRGNYWVYRP 240 NIGRLKQIVH MPVGSCRVAS GYAETGREIW RKFMLETSSW IPYETRRLAY VTILHSSEAY 300 VCGAITLARS IRQTNSTKDL VLLADDFITP KSIQGLTTAG WKIKRIQRIR SAFAKKGSYN 360 EWNYSKLRVW QLTEYDKVIF IDADLLVLKN IDSFFVHQQL SAVGNNRVLF NSGLMVVEPS 420 NCMFEYLMQK TSKLESYNGG DQGFLNEIFT WWHRLPWRLN ALKCFDGSKG ANHEMAEDLY 480 AIHYLGFKPW ACYRDYDCNW EGYERSVFAS DSAHEKWWKL YDQMPRELKS YCGLTKKMDE 540 NLKTRRVKAA KANYSDGHWK IVIKDPRQHH LEMQDIFGSV RRSLVFRTAS DNEDSPGGTL 600 VDKINSCIRK SRVFSKPSPP LPSPAMAKEN APPIRWRKGE LIGCGAFGRV YMGMNLDSGE 660 LLAVKQVLIA ANGASKEKAQ AHIKELEEEV KLLKNLSHPN IVRYLGTVRE DDTLNILLEF 720 VPGGSISSLL GKFGSFPEAG ANILVDNKGC IKLADFGASK QVVELVQKLV FLPFSSDVQY 780 FLCMVTYNAS PIELRGALLQ ATISGAKSMK GTPYWMAPEV ILQTGHSFSA DIWSVGCTVI 840 EMATGKPPWS QQYQELLESR AIWGRNSNDD DMCQIDDKED TMVGELKLSS SLMPDNIKSF 900 NPMCEPTDDE LVCKFVGSLE TKQNGMDLGL DINHQTDFPA GNSGTIGEGE KDFSFPCGTS 960 LXEEDDILTE SKITAFLDEK ALELKKLQTP LFEEFYNSLN VICSPNFVDN LPDEPTPRYL 1020 KLPPKSRSPS RGVADALXTG SPGSNGRRVS NIGNANVQTA HDMPSPPCSQ QEPGSPRDDA 1080 PSRCRRENII SKGSRFKSAE RAN* 1140 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd06631 | STKc_YSK4 | 7.0e-50 | 636 | 850 | 242 | + Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. | ||
cd06628 | STKc_MAPKKK_Byr2_like | 2.0e-53 | 635 | 854 | 249 | + Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. | ||
cd02537 | GT8_Glycogenin | 2.0e-70 | 289 | 524 | 246 | + Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases. | ||
cd06606 | STKc_MAPKKK | 9.0e-71 | 635 | 850 | 245 | + Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. | ||
cd06632 | STKc_MEKK1_plant | 5.0e-86 | 635 | 854 | 248 | + Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. |
Gene Ontology | |
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GO Term | Description |
GO:0004672 | protein kinase activity |
GO:0005524 | ATP binding |
GO:0006468 | protein phosphorylation |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABR67414.1 | 0 | 88 | 571 | 108 | 608 | glycosyl transferase [Cucumis melo] |
EMBL | CAN81983.1 | 0 | 69 | 571 | 44 | 543 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_172373.3 | 0 | 6 | 568 | 3 | 560 | PGSIP5 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 5); transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | NP_175891.1 | 0 | 69 | 574 | 55 | 557 | PGSIP4 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 4); transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002280832.1 | 0 | 69 | 571 | 44 | 543 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2clq_B | 2e-22 | 641 | 851 | 29 | 227 | A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 |
PDB | 2clq_A | 2e-22 | 641 | 851 | 29 | 227 | A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 |
PDB | 3vw6_B | 2e-22 | 641 | 851 | 15 | 213 | A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor |
PDB | 3vw6_A | 2e-22 | 641 | 851 | 15 | 213 | A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor |
PDB | 4equ_B | 6e-22 | 639 | 848 | 25 | 221 | A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor |