y
Basic Information | |
---|---|
Species | Carica papaya |
Cazyme ID | evm.model.supercontig_48.45 |
Family | GT8 |
Protein Properties | Length: 570 Molecular Weight: 66502.4 Isoelectric Point: 9.5015 |
Chromosome | Chromosome/Scaffold: 48 Start: 273337 End: 275612 |
Description | plant glycogenin-like starch initiation protein 5 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT8 | 273 | 486 | 2.8e-39 |
KSKVNGTSNSRKEAYVTILHSSESYVCGAIALAQSLRRTNTTRVLLLLHDNFLTTRSVRALRAAGWKTRLVHRIRNPFAKQNSYNEWNYSKLRVWQLTKY EKLIFIDADLLVLRNIDHLFTYPQLSAAPNDRFIFNSGLMLVEPSVCAFEEMMGQSFKVKSYNGGDQGFLNEMFTWWHRWPSKVNKLKIFKKENAKRQVG DDVYALHYLGWKPW |
Full Sequence |
---|
Protein Sequence Length: 570 Download |
MPAKPLSSHK FFLIPLLSLS FFLVVLVFSI RPFSANLNDI DRRLQSDNRP IDLIDDHAGN 60 ITHPVWYDLV KEKLSSGRKI KVALVNLNDD VKGKYQVDES VAETVHVHFR PVSKELKWKN 120 LFPEWIDEEH KWRAPRCPEI PMPPLDDDKY RGLDVVVAKV PCGTTSDKGG VRDVVRLQIN 180 LVVANLVVEN GRIGDYDDDD EIDRTAYVVF VGSCGPMQEM FRCDDRVKHV GDYWVYKPEM 240 RRLKQKVLMP VGSCQIAPPW SQTGKEIWRS FSKSKVNGTS NSRKEAYVTI LHSSESYVCG 300 AIALAQSLRR TNTTRVLLLL HDNFLTTRSV RALRAAGWKT RLVHRIRNPF AKQNSYNEWN 360 YSKLRVWQLT KYEKLIFIDA DLLVLRNIDH LFTYPQLSAA PNDRFIFNSG LMLVEPSVCA 420 FEEMMGQSFK VKSYNGGDQG FLNEMFTWWH RWPSKVNKLK IFKKENAKRQ VGDDVYALHY 480 LGWKPWICYR DYDCNWDMKD RWRFASDSAH EKWWEVYDLL PVELQRFCGL TEAMVTRMTK 540 LRGRAENGSF SDRHWRIRIK DPRQYHLVQ* 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd06914 | GT8_GNT1 | 2.0e-12 | 286 | 425 | 148 | + GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases. | ||
PLN00176 | PLN00176 | 2.0e-12 | 284 | 518 | 297 | + galactinol synthase | ||
COG5597 | COG5597 | 2.0e-14 | 352 | 515 | 192 | + Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | ||
pfam01501 | Glyco_transf_8 | 1.0e-25 | 288 | 489 | 253 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. | ||
cd02537 | GT8_Glycogenin | 8.0e-58 | 285 | 518 | 245 | + Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABR67414.1 | 0 | 80 | 568 | 108 | 609 | glycosyl transferase [Cucumis melo] |
EMBL | CAN81983.1 | 0 | 49 | 568 | 34 | 544 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_172373.3 | 0 | 7 | 564 | 8 | 560 | PGSIP5 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 5); transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | NP_175891.1 | 0 | 63 | 568 | 56 | 555 | PGSIP4 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 4); transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002280832.1 | 0 | 49 | 568 | 34 | 544 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3usr_A | 4e-23 | 280 | 532 | 19 | 288 | A Chain A, Structure Of Y194f Glycogenin Mutant Truncated At Residue 270 |
PDB | 3u2w_B | 5e-23 | 285 | 522 | 5 | 261 | A Chain A, Structure Of Y194f Glycogenin Mutant Truncated At Residue 270 |
PDB | 3u2w_A | 5e-23 | 285 | 522 | 5 | 261 | A Chain A, Structure Of Y194f Glycogenin Mutant Truncated At Residue 270 |
PDB | 3qvb_A | 5e-23 | 285 | 522 | 5 | 261 | A Chain A, Structure Of Y194f Glycogenin Mutant Truncated At Residue 270 |
PDB | 3q4s_A | 5e-23 | 285 | 522 | 5 | 261 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1), Apo Form |