y
Basic Information | |
---|---|
Species | Populus trichocarpa |
Cazyme ID | Potri.003G076800.1 |
Family | GT8 |
Protein Properties | Length: 488 Molecular Weight: 55680.6 Isoelectric Point: 8.6286 |
Chromosome | Chromosome/Scaffold: 03 Start: 10523201 End: 10528009 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT8 | 66 | 286 | 1.5e-28 |
DYEFYVAIRVMLRSLAKLQVDADLVVIASHDVPHRWVHTMEQEDGARVMRVENVNNPYKNQPNFDRRFLLTLNKLYVWKLVEYERVVMLDADNLFLRKPD ELFQCGQFCAVFINPCIFHTGLFVLQPSMEVFNDMLHQLEIGKHNPDGADQGFISSYFPDLLDMPMFHPPLNGTTVNGSYRLPLGYQMEATYYYLRLRWN VPCGPNSVITFPGALWLKPWY |
Full Sequence |
---|
Protein Sequence Length: 488 Download |
MASSREPWLM LRFLLLLVLA VYKTTAFGVV VKAGQIEQQQ QLQQEGPPQR HKNAYATMMY 60 MGTPRDYEFY VAIRVMLRSL AKLQVDADLV VIASHDVPHR WVHTMEQEDG ARVMRVENVN 120 NPYKNQPNFD RRFLLTLNKL YVWKLVEYER VVMLDADNLF LRKPDELFQC GQFCAVFINP 180 CIFHTGLFVL QPSMEVFNDM LHQLEIGKHN PDGADQGFIS SYFPDLLDMP MFHPPLNGTT 240 VNGSYRLPLG YQMEATYYYL RLRWNVPCGP NSVITFPGAL WLKPWYWWSW PVLPLGIQWH 300 EQRRQNMGYG AETTMALIQC IVFVGIIAVT RLARPNISKL CYRRTEKNIS VIQAGLKMLA 360 IWSILAAYIL PIIIIPCTIH PLLGWGLYLL GSFALCTIAI NAFMLPTLPV LTPCLGIFGV 420 LLVMAFPLYS NGIIRALSIF GYAFCAAPFL WVSVVKIMAS LQASLERENF FPRLGESSPP 480 SGFNKLY* 540 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00505 | Glyco_transf_8 | 4.0e-8 | 126 | 223 | 125 | + Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+. | ||
PLN00176 | PLN00176 | 2.0e-8 | 89 | 225 | 175 | + galactinol synthase | ||
COG5597 | COG5597 | 1.0e-8 | 63 | 225 | 178 | + Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | ||
pfam01501 | Glyco_transf_8 | 1.0e-9 | 66 | 225 | 196 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. | ||
cd02537 | GT8_Glycogenin | 1.0e-63 | 53 | 305 | 263 | + Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN77033.1 | 0 | 58 | 474 | 1 | 422 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_193393.4 | 0 | 16 | 487 | 13 | 494 | transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
RefSeq | NP_565817.2 | 0 | 38 | 487 | 50 | 497 | glycogenin glucosyltransferase (glycogenin)-related [Arabidopsis thaliana] |
RefSeq | XP_002269578.1 | 0 | 13 | 479 | 8 | 465 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002528922.1 | 0 | 8 | 487 | 8 | 483 | glucosyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u2x_B | 0.000000000001 | 135 | 285 | 83 | 221 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
PDB | 3u2x_A | 0.000000000001 | 135 | 285 | 83 | 221 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
PDB | 3u2v_B | 0.000000000001 | 135 | 285 | 83 | 221 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
PDB | 3u2v_A | 0.000000000001 | 135 | 285 | 83 | 221 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
PDB | 3u2u_B | 0.000000000001 | 135 | 285 | 83 | 221 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |