y
Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi1g72350.1 |
Family | GT8 |
Protein Properties | Length: 608 Molecular Weight: 68401.1 Isoelectric Point: 8.5189 |
Chromosome | Chromosome/Scaffold: 1 Start: 70065341 End: 70070646 |
Description | plant glycogenin-like starch initiation protein 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 313 | 528 | 1.50001e-40 |
NPKREAYATVLHSSDTYLCGAIVLAQSIRRAGSTRDLVLLHDHTVSKPALRALSAAGWIPRRIRRIRNPRAARGTYNEYNYSKFRLWQLTEYARVVFVDA DILVLRSLDALFGFPQLTAVGNDGSLFNSGIMVIEPSRCTFDALVRARRSIVSYNGGDQGFLNEVFVWWHRLPRRVNYLKNFWANTTQERALKERLFGAD PAEVWAIHYLGLKPWR |
Full Sequence |
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Protein Sequence Length: 608 Download |
MKAPPGAGES LIKSPVSGLR ATAIVKLNAA FIAFFLLAYM ALLLHPKYSH LLDRGAASLV 60 RCTFRDGACP SQSPLSRKLG GTAAANKVAM ATPTTEIRIE NAGRAPAMFD ELRGRLRMGL 120 VNIGRDDLLP LGVEGDAVAV DFDKVSDTFK WSDLFPEWID EEEEDGVPSC PEIPMPDFSR 180 HRNDDDVDVV VAALPCNRTS KGWNRDVFRL QVHLVAAHMA ARKGRRVRGG GKVRVVLRSE 240 CEPMMDLFRC DEAAGREGDW WMYMVDVARL EEKLRLPVGS CNLAMPLWGP TGIHEVFNAS 300 SAAAATGGSS SSNPKREAYA TVLHSSDTYL CGAIVLAQSI RRAGSTRDLV LLHDHTVSKP 360 ALRALSAAGW IPRRIRRIRN PRAARGTYNE YNYSKFRLWQ LTEYARVVFV DADILVLRSL 420 DALFGFPQLT AVGNDGSLFN SGIMVIEPSR CTFDALVRAR RSIVSYNGGD QGFLNEVFVW 480 WHRLPRRVNY LKNFWANTTQ ERALKERLFG ADPAEVWAIH YLGLKPWRCY RDYDCNWNVG 540 DQRVYASDEA HRRWWQVYDD MGDVMRGPCG LSERRKIEIG WERHVAQELG YDDQHWKINI 600 TDPRKWE* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00505 | Glyco_transf_8 | 3.0e-10 | 393 | 527 | 166 | + Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+. | ||
PLN00176 | PLN00176 | 2.0e-12 | 314 | 560 | 317 | + galactinol synthase | ||
cd06914 | GT8_GNT1 | 6.0e-15 | 318 | 478 | 170 | + GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases. | ||
pfam01501 | Glyco_transf_8 | 8.0e-34 | 320 | 530 | 253 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. | ||
cd02537 | GT8_Glycogenin | 2.0e-69 | 317 | 561 | 255 | + Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases. |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK92624.1 | 0 | 1 | 607 | 1 | 614 | AC079633_4 Putative glycogenin [Oryza sativa Japonica Group] |
GenBank | EAY88814.1 | 0 | 1 | 607 | 1 | 613 | hypothetical protein OsI_10286 [Oryza sativa Indica Group] |
RefSeq | NP_001049188.1 | 0 | 98 | 607 | 114 | 623 | Os03g0184300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130837.1 | 0 | 7 | 607 | 6 | 593 | hypothetical protein LOC100191941 [Zea mays] |
RefSeq | XP_002468380.1 | 0 | 7 | 607 | 6 | 605 | hypothetical protein SORBIDRAFT_01g044930 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u2x_B | 2e-21 | 317 | 558 | 5 | 254 | A Chain A, Peanut Peroxidase |
PDB | 3u2x_A | 2e-21 | 317 | 558 | 5 | 254 | A Chain A, Peanut Peroxidase |
PDB | 3u2v_B | 2e-21 | 317 | 558 | 5 | 254 | A Chain A, Peanut Peroxidase |
PDB | 3u2v_A | 2e-21 | 317 | 558 | 5 | 254 | A Chain A, Peanut Peroxidase |
PDB | 3u2u_B | 2e-21 | 317 | 558 | 5 | 254 | A Chain A, Peanut Peroxidase |