Genome Details
Selected Rep_genome_ID: SW056_bin.64
Total Genomes Found: 9
Total Genomes Found: 9
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR009427 | 1,844,875 | 95.56% | 0.2% | China | Asia | CGMR |
| CGMR010399 | 1,815,997 | 97.31% | 0.81% | China | Asia | CGMR |
| Rep_2778 | 2,044,945 | 99.1936% | 0.403226% | NA | NA | WIS |
| SPMP01_bin.16 | 1,812,091 | 92.13% | 0.81% | Singapore | Asia | SPMP |
| SPMP11_bin.37 | 1,823,127 | 93.28% | 0% | Singapore | Asia | SPMP |
| SPMP69_bin.41 | 1,943,198 | 90.32% | 0% | Singapore | Asia | SPMP |
| SPMP78_bin.40 | 1,996,571 | 96.51% | 1.61% | Singapore | Asia | SPMP |
| SPMP82_bin.7 | 2,011,020 | 98.39% | 0.81% | Singapore | Asia | SPMP |
| SW056_bin.64 | 2,010,323 | 99.19% | 0% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| SW056_bin.64_CGC9 | CGCFAM_00010 | Yes | 8 | 1 | alpha-glucan |
| SW056_bin.64_CGC10 | CGCFAM_00233 | Yes | 4 | 1 | |
| SW056_bin.64_CGC8 | CGCFAM_00325 | Yes | 6 | 2 | |
| SW056_bin.64_CGC5 | CGCFAM_00924 | Yes | 5 | 2 | |
| SW056_bin.64_CGC2 | CGCFAM_01342 | Yes | 4 | 1 | |
| SW056_bin.64_CGC4 | CGCFAM_02379 | Yes | 4 | 2 | |
| SW056_bin.64_CGC11 | CGCFAM_06943 | Yes | 3 | 1 |
Top CAZyme Families