Cluster: SW056_bin.64_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: SW056_bin.64
- CGC Family ID: CGCFAM_00924
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_58917 | k141_58917_23 | 29497 | 30270 | - | 3.A.1.3.20 |
| TC | k141_58917 | k141_58917_24 | 30313 | 31548 | - | 3.A.1.3.20 |
| TC | k141_58917 | k141_58917_25 | 31639 | 32550 | - | 3.A.1.3.27 |
| CAZyme | k141_58917 | k141_58917_26 | 32800 | 35859 | - | GH3 |
| CAZyme | k141_58917 | k141_58917_27 | 35961 | 39743 | - | GH3 |
Gene ID: k141_58917_23
Type: TC
Location: 29497 - 30270 (-)
Type: TC
Location: 29497 - 30270 (-)
Gene ID: k141_58917_24
Type: TC
Location: 30313 - 31548 (-)
Type: TC
Location: 30313 - 31548 (-)
Gene ID: k141_58917_25
Type: TC
Location: 31639 - 32550 (-)
Type: TC
Location: 31639 - 32550 (-)
Gene ID: k141_58917_26
Type: CAZyme
Location: 32800 - 35859 (-)
Type: CAZyme
Location: 32800 - 35859 (-)
Gene ID: k141_58917_27
Type: CAZyme
Location: 35961 - 39743 (-)
Type: CAZyme
Location: 35961 - 39743 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_58917_25 | vegetarian > vegan | 1.30209 | 0.01684 |
| k141_58917_27 | vegetarian > vegan | 1.08519 | 0.01684 |