Cluster: SW056_bin.64_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: SW056_bin.64
- CGC Family ID: CGCFAM_00233
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_224486 | k141_224486_33 | 43968 | 47072 | - | GH3 |
| TF | k141_224486 | k141_224486_34 | 47197 | 47907 | + | LytTR |
| pfam | k141_224486 | k141_224486_35 | 47907 | 49274 | + | HATPase_c_5 |
| TC | k141_224486 | k141_224486_36 | 49392 | 50033 | - | 9.B.27.2.3 |
Gene ID: k141_224486_33
Type: CAZyme
Location: 43968 - 47072 (-)
Type: CAZyme
Location: 43968 - 47072 (-)
Gene ID: k141_224486_34
Type: TF
Location: 47197 - 47907 (+)
Type: TF
Location: 47197 - 47907 (+)
Gene ID: k141_224486_35
Type: pfam
Location: 47907 - 49274 (+)
Type: pfam
Location: 47907 - 49274 (+)
Gene ID: k141_224486_36
Type: TC
Location: 49392 - 50033 (-)
Type: TC
Location: 49392 - 50033 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_224486_34 | vegetarian > vegan | 1.51216 | 0.01684 |
| k141_224486_35 | vegetarian > vegan | 1.59415 | 0.01684 |