Cluster: SW056_bin.64_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: SW056_bin.64
- CGC Family ID: CGCFAM_01342
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_248399 | k141_248399_10 | 12447 | 13235 | + | 3.A.1.17.2 |
| TC | k141_248399 | k141_248399_11 | 13232 | 13870 | + | 3.A.1.15.8 |
| pfam | k141_248399 | k141_248399_12 | 13929 | 14555 | + | CoaE |
| CAZyme | k141_248399 | k141_248399_13 | 14548 | 15162 | + | GH23 |
Gene ID: k141_248399_10
Type: TC
Location: 12447 - 13235 (+)
Type: TC
Location: 12447 - 13235 (+)
Gene ID: k141_248399_11
Type: TC
Location: 13232 - 13870 (+)
Type: TC
Location: 13232 - 13870 (+)
Gene ID: k141_248399_12
Type: pfam
Location: 13929 - 14555 (+)
Type: pfam
Location: 13929 - 14555 (+)
Gene ID: k141_248399_13
Type: CAZyme
Location: 14548 - 15162 (+)
Type: CAZyme
Location: 14548 - 15162 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_248399_11 | vegetarian > vegan | 4.80423 | 0.01684 |
| k141_248399_12 | vegetarian > vegan | 3.49335 | 0.01684 |
| k141_248399_13 | vegetarian > vegan | 1.31317 | 0.01684 |