Genome Details
Selected Rep_genome_ID: SPMP94_bin.81
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Species
Ligilactobacillus sp945923665
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR011572 | 1,584,206 | 96.34% | 0.03% | China | Asia | CGMR |
| CGMR082248 | 1,687,022 | 99.48% | 0% | China | Asia | CGMR |
| GH112_bin.82 | 1,829,365 | 98.25% | 0.53% | NA | Africa | H3AfricaPhase2 |
| SPMP45_bin.178 | 1,920,611 | 98.43% | 0.26% | Singapore | Asia | SPMP |
| SPMP94_bin.81 | 1,909,406 | 99.3% | 0% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| SPMP94_bin.81_CGC15 | CGCFAM_00006 | Yes | 9 | 5 | |
| SPMP94_bin.81_CGC9 | - | Yes | 6 | 3 | N/A |
| SPMP94_bin.81_CGC13 | CGCFAM_00255 | Yes | 10 | 3 | |
| SPMP94_bin.81_CGC8 | CGCFAM_00397 | Yes | 10 | 5 | |
| SPMP94_bin.81_CGC19 | CGCFAM_01290 | Yes | 8 | 1 | |
| SPMP94_bin.81_CGC5 | CGCFAM_01559 | Yes | 6 | 2 | |
| SPMP94_bin.81_CGC18 | CGCFAM_03667 | Yes | 4 | 1 | |
| SPMP94_bin.81_CGC10 | CGCFAM_03898 | Yes | 3 | 1 | |
| SPMP94_bin.81_CGC17 | CGCFAM_04772 | Yes | 4 | 1 |
Top CAZyme Families