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Genome Details

Selected Rep_genome_ID: Rep_312
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
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Family
Muribaculaceae
→
Genus
Lepagella
→
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
Rep_312 3,077,066 90.8755% 0.880503% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
Rep_312_CGC24 CGCFAM_00001 Yes 3 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_312_CGC27 CGCFAM_00001 Yes 3 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_312_CGC44 CGCFAM_00001 Yes 6 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_312_CGC3 CGCFAM_00028 Yes 8 4
Rep_312_CGC36 CGCFAM_00068 Yes 4 1
Rep_312_CGC30 CGCFAM_00148 Yes 6 4
Rep_312_CGC28 CGCFAM_00184 Yes 6 1
Rep_312_CGC6 CGCFAM_00241 Yes 3 2
Rep_312_CGC11 CGCFAM_00296 Yes 6 1
Rep_312_CGC19 CGCFAM_00301 Yes 5 1
Rep_312_CGC16 CGCFAM_00830 Yes 3 1 pectin
Rep_312_CGC10 CGCFAM_01035 Yes 5 4
Rep_312_CGC31 CGCFAM_01250 Yes 12 2
Rep_312_CGC7 CGCFAM_01312 Yes 8 1
Rep_312_CGC2 CGCFAM_01593 Yes 9 4
Rep_312_CGC18 CGCFAM_03909 Yes 5 1
Rep_312_CGC21 CGCFAM_05975 Yes 3 1
Rep_312_CGC40 CGCFAM_07924 Yes 3 1
Rep_312_CGC15 CGCFAM_09587 Yes 4 2
Rep_312_CGC14 CGCFAM_09588 Yes 4 1
Rep_312_CGC4 CGCFAM_09589 Yes 3 1
Rep_312_CGC39 CGCFAM_10282 Yes 4 2
Rep_312_CGC42 CGCFAM_11270 Yes 3 1
Top CAZyme Families