dbCAN Logo

Cluster: Rep_312_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_312_c_21 Rep_312_c_21_1 2 3136 - 1.B.14.6.1
STP Rep_312_c_21 Rep_312_c_21_2 3403 3993 + Sigma70_r2 | Sigma70_r4_2
STP Rep_312_c_21 Rep_312_c_21_3 3999 5018 + FecR
CAZyme Rep_312_c_21 Rep_312_c_21_4 5105 6100 + GH43_34
CAZyme Rep_312_c_21 Rep_312_c_21_5 6189 7388 - GH3
sulfatase Rep_312_c_21 Rep_312_c_21_6 7392 8966 - S1_14
pfam Rep_312_c_21 Rep_312_c_21_7 8966 10477 - Phosphodiest | Metalloenzyme | iPGM_N
CAZyme Rep_312_c_21 Rep_312_c_21_8 10650 11495 + GT2
CAZyme Rep_312_c_21 Rep_312_c_21_9 11562 12596 + GT4
Gene ID: Rep_312_c_21_1
Type: TC
Location: 2 - 3136 (-)
Gene ID: Rep_312_c_21_2
Type: STP
Location: 3403 - 3993 (+)
Gene ID: Rep_312_c_21_3
Type: STP
Location: 3999 - 5018 (+)
Gene ID: Rep_312_c_21_4
Type: CAZyme
Location: 5105 - 6100 (+)
Gene ID: Rep_312_c_21_5
Type: CAZyme
Location: 6189 - 7388 (-)
Gene ID: Rep_312_c_21_6
Type: sulfatase
Location: 7392 - 8966 (-)
Gene ID: Rep_312_c_21_7
Type: pfam
Location: 8966 - 10477 (-)
Gene ID: Rep_312_c_21_8
Type: CAZyme
Location: 10650 - 11495 (+)
Gene ID: Rep_312_c_21_9
Type: CAZyme
Location: 11562 - 12596 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List