Cluster: Rep_312_CGC7
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_312
- CGC Family ID: CGCFAM_01312
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_312_c_51 | Rep_312_c_51_4 | 2796 | 5852 | - | 1.B.14.6.1 |
| TF | Rep_312_c_51 | Rep_312_c_51_5 | 5899 | 9849 | - | HTH_AraC |
| sulfatase | Rep_312_c_51 | Rep_312_c_51_6 | 10099 | 11292 | - | S1_27 |
| CAZyme | Rep_312_c_51 | Rep_312_c_51_7 | 11289 | 14162 | - | CBM51 | CBM51 | GH27 |
| TC | Rep_312_c_51 | Rep_312_c_51_8 | 14159 | 15124 | - | 2.A.19.5.2 |
| pfam | Rep_312_c_51 | Rep_312_c_51_9 | 15250 | 16587 | - | AAA_14 | DUF4143 |
| pfam | Rep_312_c_51 | Rep_312_c_51_10 | 16852 | 17814 | + | DUF362 |
| TC | Rep_312_c_51 | Rep_312_c_51_11 | 17821 | 19743 | + | 1.B.14.3.1 |
Gene ID: Rep_312_c_51_4
Type: TC
Location: 2796 - 5852 (-)
Type: TC
Location: 2796 - 5852 (-)
Gene ID: Rep_312_c_51_5
Type: TF
Location: 5899 - 9849 (-)
Type: TF
Location: 5899 - 9849 (-)
Gene ID: Rep_312_c_51_6
Type: sulfatase
Location: 10099 - 11292 (-)
Type: sulfatase
Location: 10099 - 11292 (-)
Gene ID: Rep_312_c_51_7
Type: CAZyme
Location: 11289 - 14162 (-)
Type: CAZyme
Location: 11289 - 14162 (-)
Gene ID: Rep_312_c_51_8
Type: TC
Location: 14159 - 15124 (-)
Type: TC
Location: 14159 - 15124 (-)
Gene ID: Rep_312_c_51_9
Type: pfam
Location: 15250 - 16587 (-)
Type: pfam
Location: 15250 - 16587 (-)
Gene ID: Rep_312_c_51_10
Type: pfam
Location: 16852 - 17814 (+)
Type: pfam
Location: 16852 - 17814 (+)
Gene ID: Rep_312_c_51_11
Type: TC
Location: 17821 - 19743 (+)
Type: TC
Location: 17821 - 19743 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.